Tautonia plasticadhaerens: ElP_60880
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Entry
ElP_60880 CDS
T09913
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tpla
Tautonia plasticadhaerens
Brite
KEGG Orthology (KO) [BR:
tpla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpla03016
]
ElP_60880 (rnd)
Enzymes [BR:
tpla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ElP_60880 (rnd)
Transfer RNA biogenesis [BR:
tpla03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ElP_60880 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DUF6441
Motif
Other DBs
NCBI-ProteinID:
QDV38139
UniProt:
A0A518HBC1
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All DBs
Position
complement(7432793..7434055)
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AA seq
420 aa
AA seq
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MPGRHVDPLIAADAELAELVEHLRRVGRFAFDTEFVSEDTFEPVLCLVQVATRDRMVAVD
PLARGLDLDPLWEVVLDPGVEVVMHASGEDLRICRLRTGRLPDRVFDTQVAAGLAGYGYP
MSLVNLVGQTVGVSLAGSETRTDWRRRPLSDAQVEYALDDVAHLLDVADHLRDRLERRGR
VEWAEHEFSDFIESVRRRVEEDRWRRLPGAGTLGRRSLEVARRLYEWRVEEARASNRPIR
QVMRDDLMVGLARRQPRNKRDLEALRDFNRPALIARSREILDVIAEALAVPEDRLPEPGE
RVDDLPGMSMLTSLLNATMAHCAARHQISTGLVGSTGDLKELVRWHLDGQPGDRTPEILK
GWRAEVCGRALLDVLSGRLALRIDDLGSEVPVALEPVAPHPPDESDSPSPSPSNPPDGSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccgggacgccacgtcgaccccctgatcgccgccgacgccgagctggccgagctggtg
gagcacctccgccgggtcggccgtttcgccttcgacacggaattcgtctccgaggacacc
ttcgagccggtcctctgcctggtgcaggtcgccacccgggaccgcatggtggccgtcgac
ccgctggcccgggggctggatctggatccgctctgggaggtggtgctcgacccgggcgtc
gaggtggtcatgcacgcctcgggggaggatctgcgcatctgccgattgcggaccggccgg
ctgcccgatcgggtgttcgacacccaggtcgccgccgggctggccgggtacggctacccg
atgtcgctggtcaatctcgtcggccagaccgtcggcgtgagcctggccggcagcgagacg
aggaccgactggaggcgacggcccctgagcgacgcccaggtcgaatacgccctggacgac
gtggcccacctgctcgacgtggccgaccacctgagggaccgcctggagcgccgggggcgg
gtcgaatgggccgagcacgagttctcggacttcatcgagtcggtccgacgccgggtcgag
gaggaccgttggcgacggctccccggggccgggacgctgggccggaggtcgctggaagtc
gcccggaggctctacgagtggcgcgtcgaggaggcccgggcctccaaccggccgatccgc
caggtgatgcgggacgacctgatggtcggcctcgcccgccgacagccccggaacaagcgc
gacctggaagctctccgggacttcaaccgcccggccctgatcgcccggtcccgggagatc
ctcgacgtgatcgccgaggccctcgcggtgcccgaggaccggctgccggagccgggcgag
cgcgtcgacgacctgccggggatgtcgatgctcacctcgctgctcaacgccacgatggcc
cactgcgcggcccgtcaccagatctcgaccgggctggtgggctcgaccggcgacctgaag
gagctggtccgctggcacctcgacggccagccgggggaccgcaccccggagatcctgaag
ggctggcgggccgaggtatgcggccgggccctgctggacgtgctctccggccggctcgcc
ctgcggatcgacgacctcggctcggaggtgcccgtggcgctggagccggtcgccccccac
ccccccgacgaatccgactcgccatcgccatcgccatcgaacccgcccgacggatcgcca
tga
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