Tenacibaculum platacis: T19A05C_1399
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Entry
T19A05C_1399 CDS
T11461
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase 1
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tplt Tenacibaculum platacis
Pathway
tplt00521
Streptomycin biosynthesis
tplt00523
Polyketide sugar unit biosynthesis
tplt00525
Acarbose and validamycin biosynthesis
tplt00541
Biosynthesis of various nucleotide sugars
tplt01100
Metabolic pathways
tplt01110
Biosynthesis of secondary metabolites
tplt01250
Biosynthesis of nucleotide sugars
Module
tplt_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tplt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
T19A05C_1399 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
T19A05C_1399 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
T19A05C_1399 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
T19A05C_1399 (rfbB)
00525 Acarbose and validamycin biosynthesis
T19A05C_1399 (rfbB)
Enzymes [BR:
tplt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
T19A05C_1399 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
CAL2082800
LinkDB
All DBs
Position
T190524A05C:complement(1636521..1637570)
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AA seq
349 aa
AA seq
DB search
MNNILITGGAGFIGSHVVRLFVNKYPDKNIINLDALTYAGNLENLKDIETSENYTFVKAD
ICDFDTVDSIFKQYKIDSVIHLAAESHVDRSIKDPLSFARTNVMGTLSLLQAAKTNWNDD
LKGKLFYHVSTDEVYGSLGDDGFFTEKTAYDPHSPYSASKASSDHFVRSFHDTYKLPIVI
SNCSNNYGSFQFPEKLIPLFINNICTNKELPVYGEGKNVRDWLFVEDHARAIDLIFHEGK
LGDTYNIGGFNEWKNIDLVKVLIKTVDKLLGNPQGTSDKLITFVKDRAGHDYRYAIDSTK
LKDELGWEPSLQFEEGIEKTVKWYLNNQDWVKNVTSGDYLKYYKEMYEK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaataacatattaattacaggaggtgctggttttattggatcacatgttgttcgatta
tttgtaaataaatatccggataaaaatattattaatctagatgctttaacgtatgcaggc
aatttggagaaccttaaagatatcgaaacatcagaaaattatacttttgttaaggcagat
atttgtgattttgacactgttgattcaatttttaaacaatataaaattgatagtgttata
catttagctgctgaatctcatgttgatagatcaattaaagatcctttatcattcgcaaga
actaatgtaatgggaaccttaagtttattacaagcagcaaaaacaaactggaatgatgat
ttaaaaggtaagttgttttatcatgtttctacagatgaggtttatgggagtttaggagat
gatggtttttttactgagaaaactgcttatgatccacattctccatattctgcatctaag
gcttcttctgatcattttgtgagatcttttcatgatacatataaattaccaattgtaatt
tcgaattgttcgaacaattatggttcattccaatttccagaaaaattaatacctcttttt
ataaataatatttgtacaaataaagagttaccggtttatggtgagggtaagaatgtaaga
gattggttgtttgtagaagatcatgctagagccatagatttaatttttcatgaagggaaa
ttaggagatacgtataatattggtggttttaatgaatggaagaatattgaccttgttaaa
gttctaattaaaaccgtggataaacttttaggtaatcctcaaggaacttcggataaatta
ataacttttgtgaaggacagagcagggcatgattacaggtatgctatagactctacaaaa
ttaaaagatgaattgggatgggagccttcattacagtttgaagaaggaatagagaaaact
gtaaaatggtacctaaataatcaagactgggttaaaaacgttaccagtggagattattta
aaatattacaaggaaatgtatgagaaataa
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