Tenacibaculum platacis: T19A05C_1957
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Entry
T19A05C_1957 CDS
T11461
Name
(GenBank) Geranylgeranyl diphosphate synthase type II
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tplt Tenacibaculum platacis
Pathway
tplt00900
Terpenoid backbone biosynthesis
tplt01100
Metabolic pathways
tplt01110
Biosynthesis of secondary metabolites
Module
tplt_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
tplt00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
T19A05C_1957
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tplt01006
]
T19A05C_1957
Enzymes [BR:
tplt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
T19A05C_1957
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
T19A05C_1957
2.5.1.29 geranylgeranyl diphosphate synthase
T19A05C_1957
Prenyltransferases [BR:
tplt01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
T19A05C_1957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CAL2086048
LinkDB
All DBs
Position
T190524A05C:2242527..2243498
Genome browser
AA seq
323 aa
AA seq
DB search
MDLTKYFQSFITYLEAQDFNREPKNLYTPVDYILQLGGKRLRPLLTLIACDVVSGSHEKA
LPAAMAVETFHNFTLVHDDIMDEAPLRRGKETVHEKWDINTGILSGDAMLILAYQYFENY
EPIIFQKLAKLFSKTALEVCDGQQLDVDFETRNDVTISEYIKMITLKTSVLVGAALKMGA
IVGEASEEEAQGLYNFGVNLGIAFQLQDDFLDTFGNPDTFGKQIGGDIIENKKTFLYLKC
LEIANPEDQEKLQFFYNQKLEDNSIKISEVTRIFEQNDIPTLTQNLIQEYTNKSFEDLKG
LNISESAKESLIAFGKNLMTRKV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
ttggacttaacaaaatattttcagtcttttattacatatttagaagcacaggattttaac
agagaacctaaaaacttatatactccggtagactatatcttacaattaggaggaaagaga
ttaagaccattattaacattaattgcttgtgatgtagtttctggctcgcatgaaaaagca
cttccagcagcaatggctgtggaaacgtttcataacttcactttagttcatgatgacatt
atggatgaagctcctttgcgaagaggaaaggaaactgttcatgaaaaatgggatatcaac
actggaattttgtctggtgatgcaatgcttattttggcttatcaatatttcgaaaactac
gagccaattatatttcaaaaattagcaaaattatttagcaaaactgctcttgaagtttgt
gatggtcaacaattagatgttgattttgaaactcgtaacgatgtaacaatttcggaatat
ataaaaatgattacgctaaaaacctctgttttagttggagccgctcttaaaatgggagcg
attgtaggtgaagctagtgaggaagaagcgcaaggattatataatttcggagtgaattta
ggaattgcttttcaattacaagacgactttttagatacttttggtaatcctgataccttc
ggtaaacagattggaggagacattatagagaataaaaagacctttttatatttaaagtgt
ttagaaattgctaatcctgaagatcaggaaaaattacaattcttttacaaccagaaatta
gaagacaactctattaaaatatctgaagtaacgagaattttcgaacaaaacgatattcca
acattaactcaaaacttaattcaagaatataccaataaatcttttgaagatttaaaaggg
ttaaatatttcagaatcagcaaaagaaagtttaatcgctttcggaaaaaacttaatgacg
agaaaagtataa
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