Tenacibaculum platacis: T19A05C_3357
Help
Entry
T19A05C_3357 CDS
T11461
Symbol
thiC
Name
(GenBank) hydroxymethylpyrimidine moiety synthesis in thiamin biosynthesis. Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
tplt Tenacibaculum platacis
Pathway
tplt00730
Thiamine metabolism
tplt01100
Metabolic pathways
tplt01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tplt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
T19A05C_3357 (thiC)
Enzymes [BR:
tplt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
T19A05C_3357 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
CAL2093398
LinkDB
All DBs
Position
T190524A05C:3749787..3751646
Genome browser
AA seq
619 aa
AA seq
DB search
MKKKDTAPKQDGVTRNPFPNSKKIYVQGKIHPEIQVAMREITLNDTVDSMTKKRTPNEPV
TVYDTSGPYTDPDKKINIHNGLERIREDWITSRGNVEELEAFTSDYCNERLNDESLDHLR
FNLKHKPKRAKKGENVTQLHYAKKGIITPEMEYVAIRENQRIDEMTRLSKQHPGQDFGAS
IPEKITPEFVREEVARGRAVIPSNINHPEAEPMILGRNFLVKINANIGNSATTSSIEEEV
EKAVWACRWGADNIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWE
IFKDTLIEQAEQGVDYFTIHAGVRLAYVPMTAKRITGIVSRGGSIMAKWCLAHHKESFLY
THFEEICEIMKAYDVAFSLGDGLRPGCIADANDEAQFAELETLGELTKIAWKHEVQCFIE
GPGHVPMHMIKANMDKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAML
CYVTPKEHLGLPNKDDVRTGVVTYKLAAHAADLAKGHPGAQHRDDALSKARFEFRWEDQF
NLGLDPELAREYHDETLPAEGAKIAHFCSMCGPKFCSMKISQEVRDYAAQKDLEESSAIE
QGMKEKSEEFKEKGSEVYL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaagatacagcaccaaaacaagatggagtaactagaaatccatttccaaat
tctaaaaagatttatgttcaaggaaaaatacatcctgaaattcaagtagccatgcgtgaa
attacattgaatgatactgtagattcaatgacgaaaaaacgtacaccaaatgaaccagtt
acggtttatgatacatcaggaccatacacggatccagataagaaaatcaacatccataat
ggactggagagaattagagaagattggattacaagtagaggtaatgtagaagagttagaa
gctttcacatcagattattgtaacgaaagattaaatgatgaaagtttagatcacttacgc
tttaatttaaaacataaaccgaaaagagctaaaaaaggagagaatgttactcaattacat
tatgctaaaaaaggaattataactccagaaatggaatatgttgccattcgtgaaaatcaa
cgaattgatgaaatgacacgtttgtctaagcaacatcctggtcaagattttggagcaagt
attccggagaaaataactccagaatttgttcgtgaagaagtagcaagaggtcgtgctgta
attccttcaaatattaatcatccagaagcagaacctatgattttaggtcgtaatttcttg
gtgaaaattaatgcaaatattgggaactcggcaacaacatcttctattgaagaagaggta
gaaaaggctgtttgggcttgtcgttggggagctgataatattatggatttatctactgga
aaaaatattcatgaaactcgtgagtggattattcgtaactctccagttccaataggtacg
gttccaatttatcaagcattagaaaaggtaaatggcgtagctgaagatctaacttgggag
atatttaaagataccttaatagagcaagcagaacaaggtgtagattattttacaattcac
gctggagttcgtttagcttatgtaccaatgaccgcaaaacgtattacaggtattgtatct
cgtggtggatctattatggcaaagtggtgtttagcacatcacaaagagagtttcttatat
acgcattttgaggagatttgtgaaattatgaaagcttatgatgtggctttttctttagga
gatggtttacgtcctggttgtattgcagatgcaaatgatgaagctcagttcgcagaatta
gaaacattaggagagttaacaaaaatagcttggaaacatgaagtacagtgctttattgaa
ggtccaggtcacgtgccaatgcacatgattaaggctaatatggataagcaattagaagct
tgtggtgaagctccattttatacattaggaccattaacaactgatattgcaccaggttat
gatcatattacttcaggtattggagcagcaatgattggttggtacggaacagcaatgtta
tgttacgttacaccaaaagagcatttaggtttaccgaataaagatgatgttcgtactgga
gtagttacttataaattagctgcacatgctgctgacttagcaaaaggacatccaggtgct
caacatagagatgatgctttgagtaaagctcgttttgaattccgttgggaagatcaattt
aatttaggtttagatccagaattagctagggaatatcacgatgaaactttaccggctgaa
ggagcaaaaattgcacatttctgttctatgtgtggaccaaaattctgttctatgaaaata
tctcaagaagtgagagattatgctgcacagaaagatttagaggaatctagtgcgattgag
cagggaatgaaagaaaaatcagaagagttcaaagaaaaaggttcagaagtttatttataa
DBGET
integrated database retrieval system
