Tenacibaculum platacis: T19A05C_3431
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Entry
T19A05C_3431 CDS
T11461
Symbol
rimO
Name
(GenBank) Ribosomal protein uS12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tplt Tenacibaculum platacis
Brite
KEGG Orthology (KO) [BR:
tplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tplt03009
]
T19A05C_3431 (rimO)
Enzymes [BR:
tplt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
T19A05C_3431 (rimO)
Ribosome biogenesis [BR:
tplt03009
]
Prokaryotic type
ribosomal protein modification factors
T19A05C_3431 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
CAL2093746
LinkDB
All DBs
Position
T190524A05C:3823980..3825332
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AA seq
450 aa
AA seq
DB search
MRTKSTKQNKINVVTLGCSKNVYDSEVLMGQLKANGKNVVHEDPEDDGNIVVINTCGFIG
KAKEESVDTILHYAQRKEAGEVDKVFVTGCLSERYKPDLEQEITNVDQYFGTHDLPNLLK
VLEADYKHELIGERLTTTPQHYAYLKIAEGCDRPCSFCAIPLMRGKHKSTPIEELVIEAT
KLAESGIKEIMLIAQDLTYYGLDIYKKRALADLLKELVKVEGIEWIRLHYAFPSGFPMDV
LDVMRDEPKVCNYLDIPLQHINTEILKSMKRGTTHEKTTNLIHKFREYVPNMAIRTTLIV
GYPGETEEQFQELKDWVEEMRFERLGAFEYSHEENTGAYVLEDDVPADVKFRRVNEIMEV
QSQISWELNQEKIGKTFRCLFDRKDGEYYYGRTEFDSPDVDNDVIVDAREHYIKLGEFID
IEIYDAGDFDLYGTPTVKQERPVPLNKRKK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatctacaaagcaaaataaaatcaatgtagtaacattaggttgttctaaa
aacgtttacgatagcgaagtgttaatgggacaattaaaagccaatggtaaaaatgtagtt
catgaagatccagaagatgatggtaatatcgttgtaattaatacttgtggttttattggt
aaagcaaaagaagaaagtgtagatacaattttacactatgcgcaacgtaaagaggctggt
gaagttgataaggtttttgttacgggttgtttaagtgagcgttataagccagatttagag
caagaaattacaaatgttgatcaatattttggaacgcacgatttaccaaacctattaaag
gttttagaagcagattataagcatgaattaattggtgagcgtttaacaacaactccgcag
cattatgcctatttgaaaattgctgagggatgtgatcgtccatgttcgttttgtgcaatt
ccgttaatgagaggtaagcataaatctactccaattgaagagttggttatcgaagctact
aaactagcagaatctggaattaaggaaatcatgttaattgctcaagatctaacgtattat
ggtttggatatttacaagaaaagagctttagcggatttattaaaggagttagttaaagta
gaaggaattgaatggattcgtttacattatgcatttccaagtgggtttccaatggatgtg
ttagatgtgatgagagatgagccaaaggtttgtaactatttagatattcctttacaacat
atcaatacagagattttaaagtcgatgaaacgtggtactactcatgaaaaaactacaaac
ttaattcacaagtttagagagtatgtaccaaatatggcaattcgtacaacgttaattgtt
ggttatcctggagaaactgaggagcaattccaagaattaaaggattgggtagaagaaatg
cgatttgaacgtttaggtgcttttgaatattcacatgaagaaaacacaggagcttatgtt
ttagaggatgatgttcctgctgatgtgaaattccgaagagtgaatgaaatcatggaagtt
cagagtcaaatttcttgggagttgaatcaagaaaaaattggaaaaacattccgttgttta
tttgacagaaaagatggagaatactattacggaagaactgagtttgattctcctgatgtt
gataatgatgtaattgtggatgcgagagaacactacatcaaattaggtgagttcatcgat
attgaaatttacgatgctggtgattttgatttatacggaactccaacagtaaaacaagaa
cgtcctgttcctttaaataagaggaaaaaataa
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