Tenacibaculum platacis: T19A05C_3489
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Entry
T19A05C_3489 CDS
T11461
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tplt Tenacibaculum platacis
Pathway
tplt03030
DNA replication
tplt03430
Mismatch repair
tplt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T19A05C_3489
03430 Mismatch repair
T19A05C_3489
03440 Homologous recombination
T19A05C_3489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tplt03032
]
T19A05C_3489
03400 DNA repair and recombination proteins [BR:
tplt03400
]
T19A05C_3489
Enzymes [BR:
tplt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T19A05C_3489
DNA replication proteins [BR:
tplt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T19A05C_3489
DNA repair and recombination proteins [BR:
tplt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T19A05C_3489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Ribonuc_2-5A
Motif
Other DBs
NCBI-ProteinID:
CAL2094035
LinkDB
All DBs
Position
T190524A05C:3887557..3890550
Genome browser
AA seq
997 aa
AA seq
DB search
MFLNCHTYYSLRYGSIAIEELLELARSFNISTLSLTDINNTSACLEFLRTASKYGVKPVV
GVDFRNGANQEFVLIAKNNTGFENINAYLSEFLHQDTYQIPQRSKLMQDVYVVYPFQKNI
DFELLPNEFIGISYQELAKLPFSKWKNKLDKLVVLHTVSFQNKKGFNTHRLLRAIDNNEL
LSRLHESEQGELWHQFVSEETIEKYFEHYPDIISNTKDLLSSCNVVFDFSGEVPNNQKSY
TANEALDYKLLEKLSYRGLEYRYPKADEKVYVRIKKELEIIKEKGFVSYFLINWKILKYA
RSKGYFYVGRGSGANSIIAYLLRITDVDPIELDLYFERFINLYRKNPPDFDIDFSWQDRD
DITNFIFKRFPNTALITVYNTFKYRAAIRELGKVFGLPKSEIDVLSSGTYNYQTLDKLSQ
LVVIYSKFIQGFPNYLGIHAGGILISEKPIHHYCGTFLPPKGFATTQIDMVIAEDIGLYK
FDILSQRGLGKIKDAVGIVAKNHADLPPIDIHNIAKFKEDLRIKYLLKNAKAIGCFYVES
PAMRMLLKKLQVDNYLGLVAASSVIRPGVAQSGMMREYILRFRYPERRKDAHPVLLDIMP
ETYGVMVYQEDVIKVAHYFGGLTLGEADMLRRGMSGKFRSRDEFLKVKEQFFSNCRNTGK
DLNFTQEVWRQIESFAGYAFAKGHSASYAVESYQSLYLKAYFPLEYMVATINNSGGFYSV
ELYIHEARLHGGNILAPCVNHSEYIAVIEGKDIYLGFMFLQSFETKTAIKIINERINNGR
FLSLDDFIERVPISIEQITILIKIDAFRDFGKHKRELLWEAHMKINKVTFDEFNISLFQV
ERAAYEIPKLTSTQLENAFDEIELLGFPLSNPFNLLVDKNLSAFRMKNLVNYIGKIIVIE
GYLVTVKKTKTSKGKQMFFGTFLDVDGDFIDSVHFPPVAQKYPFRGKGIYRITGKVMEEF
DCITVETTMMERLAIVEDPRYADSRKAQRPKPKKRVS
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaattgtcacacatattacagtttacgttatggttcaatagctatagaagaa
cttttagaacttgctagaagttttaatattagtacgttatcgttaactgatatcaacaat
acttctgcttgtttagagtttttaagaacagcttctaagtatggtgtgaagcctgttgtt
ggtgtagattttcgtaatggagctaaccaagaatttgtgcttattgcgaaaaacaatact
ggctttgaaaacataaatgcatatttatctgagtttttacatcaggatacatatcagatt
ccacagcgttctaaattaatgcaagatgtttatgtggtttacccttttcagaagaacatc
gattttgagttattaccgaatgaatttattggcatttcgtatcaagaattagcaaaactt
cctttttctaaatggaaaaataagttagataaattggtggtattacacaccgtaagtttt
cagaataaaaaaggatttaatacacatagattattaagagcgattgataataatgaatta
ttaagtcggttacatgaatctgaacaaggtgaactatggcatcaatttgtttcagaagaa
acgatagagaaatactttgaacattatccagatataatttcgaatactaaagatctactg
agtagttgtaatgtggtgtttgatttttctggagaagtacccaataatcaaaaatcatat
acggccaatgaagctttggattataaacttcttgaaaagttaagctatcgaggtttagag
tatcgctatcctaaagctgacgaaaaagtgtatgtacgaattaaaaaagaattggagatt
attaaggagaaaggttttgtttcatactttttaattaattggaagattttaaaatacgct
cgatctaaagggtacttttatgtgggaagaggaagtggagccaatagtattatcgcctat
ttacttcgaattacagatgtagatcctatagaattggatttgtattttgagcgttttatc
aatctatatagaaaaaatcctcccgattttgatattgatttctcatggcaagaccgtgat
gatattaccaactttattttcaaaagatttccgaacactgctttaattaccgtttataat
acgtttaaatatagagcggcgataagagaattgggaaaagtgtttggtttgcccaaaagt
gaaatagatgtattgtcatctggaacttataattatcaaacgttagataagttatctcaa
cttgttgttatttacagtaaattcattcaaggttttccaaactatttaggaattcatgca
ggaggaattttaatttccgaaaaaccaattcatcattattgcggaacttttttacctcca
aaaggatttgcgactactcaaatagatatggtaatcgctgaagatatcggattgtataag
tttgatattttaagtcagagaggattaggaaaaattaaagatgcagttggaattgttgcg
aagaatcatgcagatttacctccaatagatattcataacatagcaaagtttaaagaagac
cttagaatcaaatacttgcttaaaaatgctaaagctataggttgtttttatgtagaatca
ccagccatgcgaatgttgttgaaaaaattacaagtagacaactatttgggtttggtggca
gcgagttctgtaattcgaccaggagtagcacaatcaggaatgatgcgagaatatatttta
cgtttccgttatcctgaaagaagaaaagacgctcatcctgtactgctagatatcatgcca
gaaacatacggagttatggtgtatcaagaagatgtaattaaagtagcgcattattttggc
ggattaactttaggtgaagccgatatgctcagacgaggtatgtctggtaaattcagatct
agagatgagtttttaaaagtaaaagaacaatttttttctaattgtagaaatacaggaaaa
gatttgaatttcactcaggaagtttggcgacaaatagaaagttttgcaggctatgctttt
gccaaaggacattcggcttcttatgctgtagaaagttatcaaagtttgtacttgaaagct
tattttccattagaatatatggtggcaacgattaataattctggtggtttttatagtgtt
gagctgtacattcacgaagcgcggttacatggtggaaatattttagctccttgtgttaat
catagtgagtatatagctgttattgaaggaaaagatatttatctaggttttatgtttttg
caatcttttgaaacaaaaactgcaattaaaattattaatgaaagaattaataatggacgt
tttttatcactagatgatttcattgaacgtgtaccaatttctattgaacagattaccatt
ttaattaaaattgatgcttttcgtgacttcggaaaacacaaacgtgagttgttatgggaa
gcgcatatgaaaattaataaagtaacttttgatgagttcaatatttcactttttcaagta
gagcgagctgcatatgaaattcccaaattaacatctactcaattagaaaatgcttttgat
gaaattgaactgttaggatttccactttcaaatccgtttaatcttttggtagataagaac
ctgagtgctttccgaatgaaaaaccttgtgaattacattggaaaaataattgtgatagaa
ggatatttagtaactgtgaaaaagacaaaaacatctaaaggaaagcaaatgtttttcgga
acttttttagatgtagatggtgattttatagactcggtacattttcctccagtagcgcaa
aaatatccttttagaggaaaaggaatttatagaattacaggaaaggttatggaagagttt
gattgtattactgtagaaacaacaatgatggaaaggcttgctattgttgaagatccccga
tatgccgatagtagaaaagcacaaagacctaaacctaaaaaaagagtgtcatga
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