Treponema pallidum subsp. pertenue SamoaD: TPESAMD_0230
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Entry
TPESAMD_0230 CDS
T01751
Symbol
priA
Name
(GenBank) DNA replication factor Y
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tpm
Treponema pallidum subsp. pertenue SamoaD
Pathway
tpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TPESAMD_0230 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpm03400
]
TPESAMD_0230 (priA)
Enzymes [BR:
tpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPESAMD_0230 (priA)
DNA repair and recombination proteins [BR:
tpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TPESAMD_0230 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_16
AAA_19
PIF1
ATPase_2
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AEZ57353
LinkDB
All DBs
Position
239006..240979
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AA seq
657 aa
AA seq
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MAPWLELVFDVPLDKSFTYRACAAHAGEALVGRRVLAPFGARTLIGFVISESHSSPADCG
GAVGTFKEIIRVIDREALFDQTHLACARWMAHFYLCALGQALCAVVPSRKRERTLSSFAS
CAGVRRTDTYALSGEQRKAIDAITASTGARSFYVHGVTGSGKTEVFLRAAEAVLARGKSV
IYLVPEIALTHQVLQEVYVRFGSQAAVLHSALSGSQRLGEWRRIQRMRHCVVIGARSAIF
APLKRLGLVIMDEEHDSSYKSAHVPRYHARQVAMYRCADANCPFVMGSATPSVEAWYAML
RGAVRRLPLTARVAGGAPPRVEVVDVSKEALLLSTRLVDEIRKTKEAGYQSMLFLNRRGF
SYSFQCRSCGYTLCCTQCAVPLTWHKRVGAMQCHYCGRQEAPPESCPCCHSFDTRYGGVG
TEYIEEAVQALFPEYRIARVDTDALRSGHVQQTMEQFRAGKIDVLLGTQMIAKGFNFPTL
RLVGIACADTGLHTPDFRAAERSFALMMQVAGRAGRYVDNGLVIIQTRNPAHPAVVCAQH
GDCESFYAQELAQREALCFPPFVRLIRFVFRSKTRRKAKDAAYAAHALLTAQMPLGADVL
GPAACVVAQVAGSYRMQILLRAPSFPVVQQVARSFLDEFRAPAGVYVESDVDPVNVL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtggcttgagcttgtttttgacgttccactggataaaagctttacgtaccgt
gcgtgtgctgcccacgcgggtgaggcactcgtgggtagacgggttcttgctccctttggg
gcgcgtacactcattggatttgtgataagtgaatcacattcttcgcctgctgattgcggt
ggtgcagttggcacgttcaaggagatcatccgcgtcattgacagggaagcgctttttgac
caaacgcatcttgcgtgtgcgcgttggatggcgcatttctacctgtgtgccttaggtcag
gcgctgtgtgcggtggttccgtctcggaaacgagaacggacattgtcttcttttgcttct
tgtgcgggtgttcggcgcactgacacctatgcgctttcgggcgaacagcgcaaggcgatt
gatgcgattaccgcgagcaccggtgcgcgcagtttttatgtgcacggggtgacagggtcg
gggaagacggaagtgttcttgcgcgcagccgaggcagtccttgcgcgtggcaagtcggtt
atctatcttgttcctgagatagcgctcactcaccaggtgctccaggaggtatatgtgcgc
tttggcagtcaggcggcggtgttgcactcagcgctcagtggcagtcagcgcctaggtgag
tggcggcgcatacagcgcatgcgtcactgtgtagtgattggagctcggagtgcaattttt
gctccgttgaagcggctgggccttgtgataatggatgaagaacatgacagttcgtataag
tctgcgcatgtgccgcgctatcatgcgcggcaggtagcgatgtatcgctgtgcggacgcg
aactgtccgtttgtcatggggtctgcaacaccgtctgtggaggcctggtacgcgatgctg
cggggggcggtgcgtcgtttaccattgactgcgcgtgttgcggggggggctccgccgcgt
gttgaggtggtggacgtgtcaaaagaggccctgttgctctctacccgtctggtggatgaa
atacgcaagacgaaggaggcaggatatcaatcgatgctctttttgaatcgtcgaggattt
tcctattcgtttcagtgtcgcagctgtggatacacgctgtgttgcacgcagtgtgcagtt
cccttgacgtggcacaaacgtgtgggggcaatgcaatgtcattactgtggcaggcaagag
gcgccgcctgaaagttgtccgtgctgtcattcatttgatacccgatacggcggggtgggc
acagagtatattgaggaagcagtacaagcgctatttcctgaataccgtattgcacgggtg
gacaccgatgcgctgcgctcagggcacgtgcagcagacgatggagcagtttcgcgcgggg
aaaatcgatgtactgttgggtacgcaaatgatagcaaagggatttaatttccctacgctg
cgtttagtgggtattgcctgcgcagatactggactgcacacgccagactttcgcgccgcc
gagcggagttttgccttgatgatgcaagtggccggacgtgcaggtcgctatgtagataac
ggcctggtcatcatccaaacacgcaatcctgcgcatcctgcggtggtgtgtgcgcagcac
ggggattgtgagtccttttatgcgcaagaacttgcgcagcgggaggcgctgtgttttccg
ccctttgtgcgccttattcggtttgtttttcgcagcaagacgcggcgcaaggctaaagac
gccgcgtatgcggcacatgcgcttttgacggcgcagatgcctctgggtgcggatgtactg
ggacctgcagcgtgtgtggtggcgcaggtggcaggcagctatcggatgcaaatactgctg
cgtgccccatcattcccagtggtgcagcaggtggcgcgcagctttttagatgaatttcga
gctccggcgggggtgtacgtagaatctgacgtagatcctgtaaatgtactgtag
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