Treponema pallidum subsp. pertenue SamoaD: TPESAMD_0269
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Entry
TPESAMD_0269 CDS
T01751
Symbol
miaB1
Name
(GenBank) putative MiaB tRNA modification protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
tpm
Treponema pallidum subsp. pertenue SamoaD
Brite
KEGG Orthology (KO) [BR:
tpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpm03016
]
TPESAMD_0269 (miaB1)
Enzymes [BR:
tpm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
TPESAMD_0269 (miaB1)
Transfer RNA biogenesis [BR:
tpm03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
TPESAMD_0269 (miaB1)
Prokaryotic type
Methylthiotransferases
TPESAMD_0269 (miaB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
AEZ57393
LinkDB
All DBs
Position
285317..286765
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AA seq
482 aa
AA seq
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MFSVRIETLGCRLNHVESESLAALFLQEGFAVCRGNTSTAPVVLCVINTCTVTSKAEQKA
RRLVRLLLRTYPTAIALVTGCYAQLEPASLEAMDDRVLAFPGKQKDALSLLPSCLRALLV
QRGPAPIDQYVCGMRALLASLKKKIISLELTSEFPSQTHMPTRNALPQLTGVPHAPRVSV
SSFSEPTAVPRFALYAPRFLFHSRASIKVQDGCNSGCAFCRIRFARGRAVSLETHEVIGR
VQALEARGMSEVVLTGVNLSQYRSGSIDFAGLLELIVQETHTIHIRISSLYPESVTSAFL
RAIAHTRVSPHFHLSVQSGSDRVLRRMRRAYTRADIYQAVSDLRSVRGEPFLGCDIIVGF
PGETEEDFADTQRMCKTLRFAGIHVFPFSARPGTEAFAMDAKVPQRIAGERVAAMQQLAE
KNYRAYLEYWNGRELCAVVEQSVARVLTENYLSLPIIERGGVAASAGSHVRIRVHNEGAI
LL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgttttccgttcgcatcgagacgcttggctgtcgtctgaatcatgtcgagtctgagtcg
ctggcagcgctcttcttgcaggagggctttgcggtatgccgtggcaatacctccactgcc
ccagtggttctgtgtgtgatcaacacctgcacggtcacaagtaaggcagagcaaaaggcg
cggcgcctcgttcgtctcctgttgcgcacatatcctactgcaatagcgcttgtcactgga
tgttatgcgcagcttgagcctgcttctcttgaagccatggatgatcgtgtccttgctttt
ccaggaaaacaaaaagatgccctcagccttctgccctcgtgtctccgtgcgttacttgtg
cagcgtggtcctgcgccgatagatcagtatgtatgcggtatgcgtgcgctgctcgcttct
ttgaagaaaaaaattatttctttggaactaacgtctgagtttccatcgcagacgcatatg
cccacaaggaatgcccttcctcagttaaccggtgtgcctcatgcgccgcgcgtttctgta
tcttcgttttcagaacctacagccgttccccgttttgctttgtatgcccctcgttttttg
ttccactcacgcgcaagcattaaggtgcaggacggttgtaacagtggatgcgctttttgt
cgcattcgttttgcacgcggtcgcgctgtatcacttgaaacacacgaggtaattgggcgg
gtgcaggcccttgaagctcgtggtatgagcgaggttgtacttacaggggtgaacttgtct
cagtatagaagtggcagtatagattttgcgggtttattagagttgattgtgcaggaaacg
catacgattcatattagaatttcgagtttgtacccagaaagcgtaacatctgcttttttg
cgtgctattgcgcacacgcgcgtgtcgcctcattttcatttatcggttcagtcgggcagt
gatcgcgtgttacgacgcatgcgacgcgcttacacacgtgcggacatttatcaggcagtt
tccgatttacggagtgtgcgtggagaaccctttttgggttgtgacataatcgtcggcttt
ccaggggaaacagaggaagattttgcagacacccagcgtatgtgcaaaactttgcgtttt
gcaggtattcatgtatttccgttttctgcacgccccggtacagaggcgtttgctatggat
gcaaaagtgcctcagcgtattgcaggagaacgcgttgctgcaatgcagcaactggcagag
aaaaactaccgtgcgtatttggaatattggaatgggagggaactatgtgcggtggtagaa
cagtccgtcgcacgcgttttgacagaaaattatttgagcctcccaatcattgaacggggt
ggcgtcgctgcctcagcaggatcacacgtaaggattagagttcataacgagggtgctatc
ctcttgtga
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