Treponema pallidum subsp. pertenue SamoaD: TPESAMD_0596
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Entry
TPESAMD_0596 CDS
T01751
Symbol
pcnB2
Name
(GenBank) tRNA polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tpm
Treponema pallidum subsp. pertenue SamoaD
Pathway
tpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPESAMD_0596 (pcnB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpm03019
]
TPESAMD_0596 (pcnB2)
Enzymes [BR:
tpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
TPESAMD_0596 (pcnB2)
Messenger RNA biogenesis [BR:
tpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TPESAMD_0596 (pcnB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AEZ57721
LinkDB
All DBs
Position
complement(649181..650293)
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AA seq
370 aa
AA seq
DB search
MLVRYSYDAKGRRLGRALVYTESEHGIPRQSVDAGAIRVVEALVGAGYETYIVGGAVRDL
VAGRTPKDFDIVTGAVPSRIRRLFRNSRIIGRRFRIVHVSCGSQLYEVSTFRSRVGEGSV
CVPGTLEEDAWRRDFSVNALYYDPLRNVVIDCVGGMVDLKRRRVRPLIPLRSIFVEDPVR
MLRALKCSVMCESSIPFSVRRSIRRSVSLLGGCSPSRLTDEFVKILFSGRSAALVRALCG
YQLLLYLQPSVHYFMRDVPCFESAFFASLRVLDQAFVSGRVKRVGQALTYVLRDFVGLVF
GHADAPDEVYIRVYRACRSFVLPMNPPRVELEYAVRSCLGGRGFAARAACTPSGRLCARE
NGVRCVFSSP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcgctacagttacgatgcaaagggaaggcggttggggcgtgcgctggtgtac
actgagtcggagcacggtatacctcggcagagcgttgacgctggggcgataagggttgta
gaagcgctggtgggtgcggggtatgaaacctatatcgtcggtggggcggtaagggacctg
gttgcgggaaggacaccaaaagattttgacattgttacaggcgcagttccctctaggatt
cgtaggttgttcaggaactcgcgcattatcggcaggcgcttccgcattgttcatgtgtcg
tgtggctcgcagctgtacgaggtttccacctttcgctctcgtgtgggggaaggttcggtg
tgtgttcctggcacgttggaggaagatgcatggcggagggactttagtgtcaatgccttg
tactatgatcctctgagaaatgtggtgatcgattgtgtcggtggaatggttgatctgaag
aggcgtcgcgtgcggccgctcatacctctgcggtccatctttgtagaggacccagtgcgc
atgctccgggcattgaagtgctcggtgatgtgcgagtcttccatccctttttctgtccgc
cgcagtattcgccgcagtgtttcccttcttggggggtgctctccctcccggttgaccgac
gaatttgtaaaaatcctcttttccggtcggagcgccgcgcttgtgcgcgccctatgtggg
taccagctccttctgtacttgcagccgtctgtgcactactttatgcgggatgtgccgtgc
tttgagagcgctttttttgcaagcttgagggtgctagatcaggcttttgtgtctgggagg
gtgaagcgtgtggggcaagcgcttacgtacgtgctgcgcgattttgtcggcctggtgttt
ggtcatgcagacgcaccggatgaggtgtacataagggtgtatcgagcatgtcgcagtttt
gtgttgccaatgaatcctccccgtgtagaattggagtacgcggtgcgctcttgtttgggc
ggtcggggtttcgcggcgcgcgcggcgtgtacgccttcgggtcggttgtgtgcgcgagag
aacggggtgaggtgtgttttttcttccccgtag
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