Candidatus Tremblaya princeps PCIT: TPPCIT_056
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Entry
TPPCIT_056 CDS
T01563
Symbol
dnaQ
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tpn
Candidatus Tremblaya princeps PCIT
Pathway
tpn03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPPCIT_056 (dnaQ)
03430 Mismatch repair
TPPCIT_056 (dnaQ)
03440 Homologous recombination
TPPCIT_056 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpn03032
]
TPPCIT_056 (dnaQ)
03400 DNA repair and recombination proteins [BR:
tpn03400
]
TPPCIT_056 (dnaQ)
Enzymes [BR:
tpn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPPCIT_056 (dnaQ)
DNA replication proteins [BR:
tpn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPPCIT_056 (dnaQ)
DNA repair and recombination proteins [BR:
tpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPPCIT_056 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEI75121
UniProt:
F7XYE5
LinkDB
All DBs
Position
complement(53672..54595)
Genome browser
AA seq
307 aa
AA seq
DB search
MACQHYNLTLRAGSVTLSWVVLNKNRRTQLTQHRKRCPACQPRVKHDGCKVATQHDVAVV
WWTQTLSKSRYYSLSRTRRSTMQTRYVVLDTETTGLSPRYHRLAEVGCVEIACGRITGNY
FHAYINPRQRMTRGAQAVHGLRDEFLATQPAFSAIAQRLLFFLCQSTLVGHNLSFDLNFL
DAGLATAGFMPAARYCHGVIDTMCHLAQRGSRRRFSLDACCDMLGVRRGDRARHGALVDA
VLLAEAFVVAKRTRPKIGYNCATMSLHCCLGLHPGLPEVQPGADDLIAPRRSCTWHKDEG
MLYDVAG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttggcatgtcagcactacaacctgactctgagagctgggtccgtaactctctcctgggta
gtgttgaataagaatcgccgaacgcaactcactcagcaccgcaagcgctgccctgcatgt
cagccacgtgtcaagcacgatggatgcaaggttgctacgcagcatgatgttgccgtggtg
tggtggactcagactttaagtaagtcgcggtactacagcctatcacgcacccggagatca
acgatgcagacacggtacgtagtgctggacactgagaccaccggcctcagccctcgctac
cataggctggcagaggtggggtgcgtggagattgcatgtgggcgcatcactggaaactac
ttccacgcatacataaacccgcggcagcgcatgactagaggcgcccaggctgtgcatgga
ctgagggacgagttcctcgctacgcagcctgctttcagcgccattgcccagcggctgcta
ttcttcctgtgccaatctacgctagtgggacacaacctgtcattcgatctgaactttctg
gatgcagggctcgcaacagctggcttcatgccggctgcgagatactgccacggcgtcata
gacacgatgtgtcaccttgcgcagcgcggcagcaggcgtaggttttcactggatgcctgc
tgcgatatgctgggagtacggagaggggatagggcaaggcatggcgccctcgtggacgcc
gtgctccttgcagaggccttcgtcgtggccaagcgaaccagaccaaaaatcggctacaat
tgcgccaccatgagcctgcactgctgcttagggctacaccccggtcttcccgaagtgcaa
cctggcgctgatgacctgatagcgccacgacgctcttgtacgtggcataaagacgagggc
atgctgtatgacgttgcaggctga
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