Treponema pallidum subsp. pallidum Mexico A: TPAMA_0077
Help
Entry
TPAMA_0077 CDS
T02273
Symbol
capD
Name
(GenBank) capsular polysaccharide biosynthesis protein CapD
Organism
tpo
Treponema pallidum subsp. pallidum Mexico A
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
KR
NAD_binding_10
CoA_binding_3
Ldh_1_N
adh_short
CoA_binding
Motif
Other DBs
NCBI-ProteinID:
AFU66108
LinkDB
All DBs
Position
84265..85881
Genome browser
AA seq
538 aa
AA seq
DB search
MCGASLGDCVGSCARVNALYVGRDGVGAENVWGCGRSAVRESAHRDGIYIVGAGFAGSVL
AREIQTKKVLGTVIAFLDDDPCKIGSNLHGVPVLGPIFEVARIVRITPHDHALIAIPSIS
IERLRDIYLTLRAAGFTVIKLLPALAQIIDGTAHLVQTREIDPQDLLTRTPVTINLKKSL
AYLCGKRVLVTGAGGSIGSELACQLLSGDVERLYLFGHGENSIYQIDKKIRRLQEEGVGS
RTVIVPVIGDLKDAAYVRYLIEQLRCDAVFHAAAYKHVPMMELNPVSVIENNVFGTKFLL
DACIACRVKRFVLLSTDKAVDPVSIYGVSKMLNEKNVLYAAERVRDFGHDAAYMFVRFGN
VLGSRGSIMPLFIEQIKKGGPVTVTDPAMTRFFMTIPEACSLVLQVGGVGVNGASYLLDM
GEPVSIMETAQQLIRYFGYEPDRDIPIHVVGLRPGERLSEPLVSKDERIEPTVYPKVLRL
REREPLDFAHLERLWDQLYPYCFPSGEKVRYRHKEGLVRVLCDSCATLKQRYMPNSEA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggcgcatccctgggagactgcgtcgggtcgtgtgcgcgtgtcaatgcgttgtat
gtagggagagatggggtgggtgcagaaaatgtatggggctgtggtaggtctgcggtgaga
gagagtgcgcaccgggatggcatctacatcgttggcgcaggattcgcagggagtgtcctt
gcccgtgagatccaaacgaaaaaagtactcggcacagttattgcttttttggatgacgat
ccgtgcaaaatcggatcgaatcttcacggtgtcccggtgcttggtcccatttttgaagtt
gcccggattgtgcgtattactccgcatgatcacgcgctgattgcaattccttctatctcc
attgagcgtttgcgtgacatttacctgacgctgcgcgctgcggggtttacggttatcaaa
cttctgccggcgcttgctcaaatcatcgatggtactgcgcatttagtgcaaacacgtgaa
attgatccgcaggatttactcacgcgcacaccggtgaccattaatcttaaaaagagcctg
gcgtacctatgcgggaaacgcgtgttagttactggtgctggaggatctatcggcagcgaa
ctagcctgtcagttgctctctggtgatgtggagcgtctctatttgttcggtcatggagag
aactccatctaccaaatcgataaaaaaattcgtaggctgcaggaagagggtgttggatct
cgcacagttattgttcctgttattggcgatttaaaggatgctgcgtacgtgcgctatctt
atcgagcagctgcgctgcgatgcggtttttcatgctgccgcgtataagcacgttcctatg
atggaactcaatcctgtttcagtgattgaaaataatgtcttcggcaccaaattcttgctc
gatgcctgtattgcgtgtagggttaagcgctttgtacttttgtccactgacaaggccgtg
gatcctgtttctatctacggagtatctaagatgctcaacgagaagaatgtcttgtatgct
gctgagcgtgtgcgcgatttcggtcacgatgccgcgtatatgtttgtccgttttggaaac
gtattgggttcccgtggttctatcatgccgctctttattgaacaaataaagaaagggggg
cccgttaccgtgacagatcctgccatgacacgattctttatgactattcccgaagcgtgt
tcactcgttttgcaagtcggtggagtaggagtaaatggagcgtcgtatcttttggacatg
ggggagcctgtgagcattatggagactgcgcagcaacttattcgctattttggttacgag
ccagacagagatattcctatccacgtggtaggcttgcgtcctggcgagcgtctcagtgag
ccactcgtttccaaagacgagcgtatagagccgacggtatatccaaaggttctgcgtttg
cgtgaacgtgaacctttggattttgcgcaccttgaacgcctgtgggatcaactgtatcct
tactgtttcccttcaggagaaaaggtgcggtaccggcacaaagaaggacttgtccgcgtg
ctatgcgactcgtgcgcgacactgaaacagcggtatatgccaaatagcgaggcatag
DBGET
integrated database retrieval system
