Treponema pallidum subsp. pallidum Mexico A: TPAMA_0212
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Entry
TPAMA_0212 CDS
T02273
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpo
Treponema pallidum subsp. pallidum Mexico A
Pathway
tpo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TPAMA_0212 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpo03021
]
TPAMA_0212 (rpoA)
03400 DNA repair and recombination proteins [BR:
tpo03400
]
TPAMA_0212 (rpoA)
Enzymes [BR:
tpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TPAMA_0212 (rpoA)
Transcription machinery [BR:
tpo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TPAMA_0212 (rpoA)
DNA repair and recombination proteins [BR:
tpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TPAMA_0212 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
AFU66236
LinkDB
All DBs
Position
217197..218252
Genome browser
AA seq
351 aa
AA seq
DB search
MPRRNLLKGFKRPKVLEFLSENSSECYGKFTASPFETGFGTTVGNCLRRVLLSSIQGYAV
TGVRITSFDADGVAHFISSEFEQIPHVREDTLEILNNFKRLRFLLPQGAESSTFTYEFRG
AVSLTGKDFAKKFQLEVLSQDLLIMEMMDGAHVEVELHVEFGRGYVPAESHDRYADLVGV
IPVDAIFSPVLRVRYDIQSCRVGQRGDYDQLSLEVWTDGTVRPEDAIAEAAKIIKEHFTV
FVNFDETALDLEDEPEEDDPAVLELLNTKIADVDFSVRARNCLLTMGIKTLGELTRISEQ
TLANTRNVGKKSLSEIQGKLQEYNLRLGMADYNHVGVVSRLMRQKEEIDEA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtagaaatcttttgaagggttttaaaagacctaaggtgctggagtttctttcg
gagaactcaagcgagtgttatgggaagttcaccgcctctccttttgagactggttttggc
accactgttggtaactgtttgcggcgcgtcttactctcttctatccaggggtatgcggtc
accggggttcgcatcacgtcctttgatgcggacggggttgcgcacttcatttcaagcgag
tttgaacagattccccacgtacgggaagataccctcgagattctaaataattttaagcgt
ctgcgttttctcctgccgcagggggcagagtctagtacgttcacgtatgagtttcgcggc
gcggtgtctttgacggggaaggactttgctaagaagtttcaactcgaggttctgtctcaa
gacctgctcatcatggaaatgatggacggtgcgcatgttgaagtagagctacacgtcgaa
ttcgggcgtgggtatgtacctgctgaatcgcacgatcggtatgccgatttagttggggtt
atccctgttgacgcaatttttagtcccgtgttgagagtccgctatgatattcagtcttgc
cgtgtaggtcagcggggggattacgatcagttatcccttgaagtgtggacagatggtacg
gtgcgtcccgaagacgcgatagccgaggcagcgaaaattatcaaggagcactttacagtt
tttgttaattttgacgagaccgcgctcgacctggaggacgagccagaagaggatgaccct
gccgttctggagctgttgaacacgaaaatcgctgatgtagatttttcagtgcgcgcgcgt
aactgccttttaactatgggaatcaagacgctgggggagttgacaaggatttctgagcag
acacttgcgaatacgcgtaatgtgggtaagaaaagtttaagtgagatacagggcaagttg
caggaatataacttgcgtctgggtatggctgactacaaccatgtgggggttgttagtaga
ctgatgcgacagaaggaagaaatagatgaggcatag
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