Treponema pallidum subsp. pallidum Mexico A: TPAMA_0587
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Entry
TPAMA_0587 CDS
T02273
Symbol
holA
Name
(GenBank) DNA-directed DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
tpo
Treponema pallidum subsp. pallidum Mexico A
Pathway
tpo03030
DNA replication
tpo03430
Mismatch repair
tpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPAMA_0587 (holA)
03430 Mismatch repair
TPAMA_0587 (holA)
03440 Homologous recombination
TPAMA_0587 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpo03032
]
TPAMA_0587 (holA)
03400 DNA repair and recombination proteins [BR:
tpo03400
]
TPAMA_0587 (holA)
Enzymes [BR:
tpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPAMA_0587 (holA)
DNA replication proteins [BR:
tpo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPAMA_0587 (holA)
DNA repair and recombination proteins [BR:
tpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPAMA_0587 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
ParBc_2
DUF4406
Motif
Other DBs
NCBI-ProteinID:
AFU66582
LinkDB
All DBs
Position
complement(641568..642590)
Genome browser
AA seq
340 aa
AA seq
DB search
MSVWLFTGPEIGERDSAVQEVCARAQAQGTVDVHRLYAHETPVADLVDLLRTRALFADAV
CVVLYNAEVIKKCDEVHVLTEWIKDGGSRADVFLVLISDSVSIHKRIEQNISPVHKRVFW
ELFENKKHAWVQRFFFQHEMRIEQEAIESLLELVENNTRALKTVCTQLSLFFEKGRRITA
HDISSLLVHTKEETSFTLFDALSKRDLEHSLMILNTLLCSKDVAPVQILAGLAYAFRRLA
HWHHIPEDKTHPATLKRYGFTSRRMIAQYQRAASLWTLSDTHAILDRLFQTDAMIRSGGT
PLQGPLMQLCLYAIVVHAGRAPHRYCTTLQEQCGLQNEIY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctggctttttaccggacctgaaataggggagcgagatagtgcagttcaggag
gtgtgcgcgcgtgcacaagcgcaagggacggtggacgtacatcggctctatgcacacgaa
acgcctgtggcagatcttgtagatctcctgagaactcgtgcgctgtttgcagatgcagtc
tgcgtggtactgtacaacgcagaggttattaagaagtgtgacgaagtgcacgtgcttaca
gaatggataaaggatggcggctcgcgcgctgacgtgtttttggtactgatttccgatagt
gtcagtatacataagcgtatagaacagaatatttctcccgtgcataagcgtgttttttgg
gagttgtttgaaaataaaaaacacgcgtgggtgcagcgatttttttttcagcatgaaatg
cgcattgaacaggaggctatcgaatctcttcttgagttggtggagaacaacactcgtgcg
ctcaaaactgtttgtacgcagctttctcttttttttgaaaaaggacgccgcatcactgcg
cacgacattagttcgttgctggtgcacacaaaagaagagacatcgtttaccttattcgat
gcgctgtccaaacgagatcttgagcattcacttatgattctcaacacgctgctttgttcg
aaagacgttgcccctgtacaaatccttgcaggactcgcttacgcgttccgtcgccttgcg
cattggcaccatataccggaggacaaaacgcaccctgcaacgctaaagcgctatgggttc
acttctcggcgtatgattgcgcaataccagcgcgctgcgtctctttggaccctgagcgat
acgcatgctattttggatagattgttccagacagacgcaatgatccgctcaggtgggacg
cctctccaagggccgctgatgcagctgtgcctttacgcgattgtagtgcacgcgggtagg
gcaccacacaggtactgcacaacgctgcaggagcagtgcggactacagaacgaaatttac
taa
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