Treponema pallidum subsp. pallidum Mexico A: TPAMA_0623
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Entry
TPAMA_0623 CDS
T02273
Name
(GenBank) membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
tpo
Treponema pallidum subsp. pallidum Mexico A
Brite
KEGG Orthology (KO) [BR:
tpo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpo01011
]
TPAMA_0623
Enzymes [BR:
tpo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TPAMA_0623
Peptidoglycan biosynthesis and degradation proteins [BR:
tpo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TPAMA_0623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
AFU66614
LinkDB
All DBs
Position
678456..680795
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AA seq
779 aa
AA seq
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MRARVRRSRQSACTSSGRRFFNRVSGGMISEKKSGSPGMSGYVPFSTSSSAVRYGCAVLY
SGTCQETASCGYTSCISAAHTRRYSRLCGVNPAGSRCMHAAASRNEAGEAVSIKKSIFGS
ISFVRIARRSGTSSAVPRTGCAATSGAWDAEETGSVPARVGTTFEELRQQRKTGISTKPT
LTPMARSMLLVSAPIETRFYLPAWQSCHLHKTPVVTVPTTYAYPAHRRFFSLYAVFNAHG
ASLVLPTQDMLGWLPPRAKRAYRRLTVFLREIITARACSLFLFLLRCFPAGPCARARRLS
FLLFLCGAAACPPLWGAYAAHHALRAQSVPDTLIQRALVLGPLVHPLYPPMQSFKEQYRS
ARYREYLSVVMQRSAPYRPFIEKLLRDAHLPVELLFLPVVESGFLERAVSKSGAVGIWQF
MRNSIAGSAMRVSDWVDERRDPWKASVAAVKKLQWNYTQLRDWPLALAAYNCGLGAIKRA
IAQAGTADFWHLSERGFLRDETVRYVPKFLAVAEVLSRSHEHGIAWGAAHTPEETTTVTV
SRAVDLNLLAQAAGMDAQLLHTLNPALRYSITPPNAAYTLRVPSTHAQAVQAVLNRPGAV
LVHHTLHTIRSGDTLYALARRYGLGVDTLKAHNRAHSATHLKIGQKLIIPTIRTGQTRRA
PLRGAGTRAPGVMDQKEHAVPEVSALPSSSMTPPTPGGADTRAGADAPAPPSVPPPPEST
AARATPAAPFVGKHVVQQGDTLWSLAKRYGVSVENLAEENNLAVDATLSLGMILKTPRR
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgcgcgcgtcaggcgttctcggcaatctgcgtgtacctcatcaggaaggcgtttt
ttcaacagagtcagcgggggaatgatatccgaaaaaaaatccggttctccaggaatgagc
ggatacgtacctttttccacgtcatcgagcgcagtcaggtacggatgcgcggtgttgtac
agcggcacatgccaagaaacagcttcctgcggatatacaagttgcataagcgcagcacac
acgcggaggtacagccgattgtgcggtgtcaatccggccggatcgcgctgtatgcacgca
gctgcctcgcgcaatgaggcaggagaagcagtttcaatcaagaagagtatctttggatcc
atcagctttgtgcgaattgcgcgtcggtccggtacgtcaagcgcagtgccacgcacagga
tgcgccgccacctccggcgcctgggatgcggaagaaaccggatcggtacctgcgcgcgtc
ggcaccaccttcgaagaactgcgacaacagagaaaaacgggtatcagcacaaaaccgaca
ctcaccccgatggcgcggtcaatgcttttagtaagcgcccccatagaaacccgtttttac
ctccctgcatggcagtcgtgccatttacacaaaacgcctgttgtgaccgtaccgacaacg
tacgcatacccggcgcaccgccgcttcttttccctttacgcggtgttcaacgcgcacggc
gcatcccttgtgctccccacgcaagacatgctaggctggctgccaccgagggcgaagaga
gcgtacaggaggttaacggtttttttgcgagaaatcattaccgcccgtgcgtgttcactc
ttcctgtttctccttcgttgtttccctgctggtccctgtgcgcgggcgcgccggttgtcc
ttccttctgtttctctgtggtgcggcagcctgccctccgctttggggggcgtacgcagcg
caccacgcgttgcgcgctcagtcggtacctgacaccctcattcagcgcgcgctcgtgctc
ggtccgctcgtgcaccccctgtacccgccgatgcagtccttcaaagaacagtaccggagc
gcgcgttaccgggaatacctctctgtcgttatgcagcggagcgcgccctaccgccccttt
atcgaaaaactgctgcgcgacgctcaccttcctgtcgagctgctctttctccccgttgtc
gaatcgggctttctcgaacgggctgtctccaaatccggcgcagtcggcatttggcagttc
atgcgcaatagcatcgcaggatctgccatgcgcgtgagtgactgggtagacgaacggcgt
gacccctggaaggcttccgtcgccgcagtcaaaaaactgcagtggaattacacgcagctg
cgtgactggcccttggccctcgctgcgtacaactgcggtcttggcgcgatcaagcgagcc
attgcccaggcaggaaccgccgatttttggcatctgagtgagcgcggctttctgcgcgac
gagacagtccgctatgtcccaaagttccttgcggttgcagaagtactcagccggagccac
gagcacggcatcgcctggggagcggcacacacccccgaggagaccaccacggttaccgtt
tcgcgcgcggtagacttaaacctcttggcacaggcagcagggatggatgcgcaattgttg
cacacgctcaaccctgcactccgctattcaattactcccccgaatgcagcgtacaccctc
cgggtgccaagcacacatgcgcaggcggtccaggcagtactcaaccgcccaggcgccgtg
ctcgtccatcacaccctgcacaccatccgttcaggagacacgctttacgcactcgcccgc
cgctatgggttgggcgtcgatacgctaaaagcccataaccgcgcacacagcgccactcac
ctgaagattggacaaaagctcatcattcccaccatccggactgggcagacccggcgcgcg
cccctgcggggggcaggcacgcgtgcacctggagtaatggatcagaaagagcatgcagtg
ccggaagtgtccgcacttccctcgtcctcaatgacgccgccgacgcccgggggcgcggac
acgcgcgcgggagcagacgcgccggcacccccgagcgtgccaccaccgccggaaagcaca
gcggcgcgggcaacccctgcagcaccctttgtcggcaagcatgtagtgcagcagggggat
accctctggtccttagcaaagcgctacggcgtttcagtagaaaacctggcagaggaaaac
aatctagcagtagacgccacgctctccttgggaatgattctcaaaacgccgagacggtag
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