Treponema pallidum subsp. pallidum Mexico A: TPAMA_0709
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Entry
TPAMA_0709 CDS
T02273
Symbol
whiG
Name
(GenBank) DNA-directed RNA polymerase sigma subunit WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
tpo
Treponema pallidum subsp. pallidum Mexico A
Pathway
tpo02020
Two-component system
tpo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TPAMA_0709 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TPAMA_0709 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpo03021
]
TPAMA_0709 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tpo02035
]
TPAMA_0709 (whiG)
Transcription machinery [BR:
tpo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TPAMA_0709 (whiG)
Bacterial motility proteins [BR:
tpo02035
]
Flagellar system
Flagellar assembly proteins
Stator
TPAMA_0709 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AFU66694
LinkDB
All DBs
Position
777863..778651
Genome browser
AA seq
262 aa
AA seq
DB search
MGNTAFEQQSEEELWLEYRRTRSAKIREYFVVQYAPLVKYVASKIAVGKPGNVEFDDLVS
YGIFGLFDAIDKYDPEKNIRFNTYAVTRIRGAIFDELRSIDWVPRSVRQQTRQIEEAIAD
LEARLGRAATDTEIACALNIELEEYHQLLLKVSGTSVISLADSKFGGDERDHVSVGDSIE
APASLNPDVIVEREEIKRIIAEAIRELSQREQQVLILYYYEEMTLKEIGKVLKVTESRIS
QIHTSANLKLKAKLTNIKKGIR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacagccttcgaacagcagtcggaagaggagctttggctcgagtatcggagg
acgcgtagcgcgaaaatacgcgagtactttgttgtgcagtacgctcctctggtcaaatac
gttgcaagcaaaattgccgttgggaaaccggggaacgttgagttcgatgacctcgtaagc
tacggtatctttggtctttttgacgctatcgataaatatgacccagaaaaaaacattcga
tttaatacgtacgcggttacgcgcatccgcggtgctatctttgatgaactgcgctccatc
gactgggttccccggtcggtgcgtcagcaaacacgccagatagaagaagcgattgcagat
ctagaggcacgccttgggcgtgctgccacagatactgagatcgcgtgcgcgctgaatatt
gagcttgaagagtaccaccagctcctcttgaaggtgtccggcacgagcgtgatttccctt
gccgattcgaagtttggtggagatgagcgagaccacgtctctgtgggagacagcatcgaa
gcgcccgcttctctcaatcccgacgtcattgtcgaacgcgaggaaatcaagcgtatcatc
gcagaggcaattagggaactttctcaacgcgagcagcaggtgctcatactatactactac
gaagaaatgaccttaaaggagattggcaaggtgctcaaagtgaccgagtcgcgtatctct
cagatccacaccagcgcgaatttaaagttaaaggcaaagctcaccaacatcaaaaagggt
atccggtaa
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integrated database retrieval system
