Treponema pallidum subsp. pallidum Mexico A: TPAMA_0809
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Entry
TPAMA_0809 CDS
T02273
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tpo
Treponema pallidum subsp. pallidum Mexico A
Brite
KEGG Orthology (KO) [BR:
tpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpo03019
]
TPAMA_0809 (rnc)
03009 Ribosome biogenesis [BR:
tpo03009
]
TPAMA_0809 (rnc)
03036 Chromosome and associated proteins [BR:
tpo03036
]
TPAMA_0809 (rnc)
Enzymes [BR:
tpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
TPAMA_0809 (rnc)
Messenger RNA biogenesis [BR:
tpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TPAMA_0809 (rnc)
Ribosome biogenesis [BR:
tpo03009
]
Eukaryotic type
90S particles
RNase
TPAMA_0809 (rnc)
Prokaryotic type
rRNA processing factors
TPAMA_0809 (rnc)
Chromosome and associated proteins [BR:
tpo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
TPAMA_0809 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AFU66791
LinkDB
All DBs
Position
879842..880606
Genome browser
AA seq
254 aa
AA seq
DB search
MSLCLGHIFSRSRSPLTPERRESLRRLQETLGVKFRDPTALDQALSHRSLFSSKEDHCGV
RHNERMEFLGDAVLGAVAAACLYRALPDSHEGDLAKTKAVLVSTDTLSDIALSLRIDHYL
LLGKGEELSGGRHKKAILADATEAVIGALFLDSGFKAAERFVLRLLLPRVRPIREKNLHH
DYKSTLQVLAHQRYRSKPEYTVVKRTGPDHSVRFWVDVTVGDARFGPGYGTSKKSAEQCA
ARLAWEQLSGTLRE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtgtctcggtcatattttttcccgctctcgttctcccctcacccccgagcgt
agggagtctctccggcgcctgcaagagacgctcggcgttaaattccgcgatcctaccgca
ctcgaccaggcactttctcaccggtctttgttttcctcaaaagaggaccattgcggtgtg
cgccacaatgagcgcatggagtttctcggggatgccgtgcttggcgcggtagccgccgct
tgcctgtatcgcgcacttcccgacagtcacgagggggatttagcaaagactaaggcggtg
ctcgtgtctactgacaccctctcggacattgccttgagcctgcgtatagaccactacctt
ctgctaggaaaaggggaggagctttcaggaggtcggcacaaaaaagccatccttgccgac
gctaccgaagctgtcatcggtgcgctttttttggattcagggttcaaggcggcagagcgt
tttgttctccgtctcctgctcccccgtgtccgccccatacgagagaaaaatttgcaccat
gactacaaatctaccctccaggtgcttgcacatcagcgctatcgtagtaagccggagtac
acggtcgtcaagcgcaccggacctgatcacagcgtacgcttctgggtggatgttaccgtt
ggcgatgcacgcttcggacccggttatggcaccagcaaaaaaagcgcagaacagtgcgcc
gctcgccttgcatgggaacaattatccggcaccctccgggagtag
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