Treponema pallidum subsp. pallidum Mexico A: TPAMA_0819
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Entry
TPAMA_0819 CDS
T02273
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tpo
Treponema pallidum subsp. pallidum Mexico A
Brite
KEGG Orthology (KO) [BR:
tpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpo03016
]
TPAMA_0819 (rnz)
Enzymes [BR:
tpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
TPAMA_0819 (rnz)
Transfer RNA biogenesis [BR:
tpo03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
TPAMA_0819 (rnz)
Prokaryotic type
TPAMA_0819 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
DUF72
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AFU66799
LinkDB
All DBs
Position
complement(889042..889974)
Genome browser
AA seq
310 aa
AA seq
DB search
MHMNLEAFILGCGGMVPLPHRHLTSVLLRREGELFLFDAGEGTQVSLRRLSLRWKKISAI
FISHTHADHITGLPGLLMLSSQVARSEPLYIIGPPRTAEYVETSRRILDMYINYEIIVKE
VIEPQVVYRGKDFQVRCFCLDHTKPCMGYTLEEQDRPGSFDPRAAQDLHVPCGALWSQLQ
SGVAVQSAQGVTVYPEQVMGPARPGRKVSFVTDTKYLQSIAAEVRNSDFFVCEGMFEKGM
EKDAAEKKHMTCVQAATIARDARVRLMALIHYSPRYTDHELKRLLKEAQRVFPHTILSRD
QLMVPIAYRE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgcatatgaatcttgaagcgtttattttagggtgtggcggcatggtgccattaccccat
cggcatctgacttctgtgttgttgcgtcgtgagggagagttgtttctgttcgacgctggg
gaaggtacccaagtgtcgttgcggcgtctgagcttacgctggaagaaaatcagtgccatt
ttcatcagtcacacccatgcagaccacatcactgggctgccggggcttttgatgctctct
tctcaagttgctcgcagcgaaccgctgtacatcatcggtcctccaagaactgcagagtat
gtggaaacgagccgcaggattttggacatgtacattaattacgagattattgtcaaagag
gtgatagaaccacaagtggtataccgtggtaaggattttcaggtgcgctgtttttgtctg
gatcataccaagccgtgtatgggctacacgctagaagagcaggatcgtcccggatcattt
gacccgcgcgcggctcaggatttgcacgttccctgtggggcgctgtggtctcagttacag
tcaggggttgcagtgcagtccgcgcagggggtgacagtatatcctgaacaggtaatggga
ccggcgcgtccggggcgtaaggtgagcttcgtcactgatacaaaatatttgcagtccatt
gcagccgaggtgcggaattcggatttctttgtgtgtgagggaatgtttgagaaagggatg
gaaaaggatgcagcagagaaaaagcatatgacgtgcgtgcaggcagccacgatagcgcgc
gatgcgcgtgtgcgacttatggcactcatccactatagccctcgatataccgatcacgag
ttgaaacgtttattaaaggaagcgcagcgtgttttcccgcacactattctgtctcgtgat
caattgatggttcccattgcgtatcgagaatag
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