Treponema pallidum subsp. pallidum Mexico A: TPAMA_1017
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Entry
TPAMA_1017 CDS
T02273
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
tpo
Treponema pallidum subsp. pallidum Mexico A
Pathway
tpo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TPAMA_1017 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpo01007
]
TPAMA_1017 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpo03016
]
TPAMA_1017 (alaS)
Enzymes [BR:
tpo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
TPAMA_1017 (alaS)
Amino acid related enzymes [BR:
tpo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
TPAMA_1017 (alaS)
Transfer RNA biogenesis [BR:
tpo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
TPAMA_1017 (alaS)
Prokaryotic type
TPAMA_1017 (alaS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
AFU66991
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Position
complement(1109962..1111779)
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AA seq
605 aa
AA seq
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MSIPIRADQLRSRYLAFFSQKAHVVISGKSLVPEHDPTVLFTTAGMHPLVPYLMGEPHPA
GTRLVNAQKCLRTGDIDAVGDNSHLTFFEMLGNWSLGDYFKEEAIAFSFEFLTGAPWLGI
SPDRLSVTVFAGDEAVARDEESAAIWERLGIARTHIHFLPRADNWWGPTGETGPCGPDTE
IFFDTGVPPCSVSCRPGCSCGKYVEIWNDVFMQYRKDADGRYRPLERYCVDTGMGIERTV
AVLQGKRSVYDTEIFTPLLERIGQLCGKRYGCQGAHDVSMRIVCDHIRAATFILGDPVPV
RPSNVGAGYVLRRIIRRSVRHGRKLGIDGEFLSSLARVVIGQYAAVYPELEEKATCIAQE
LANEERKFLDALRKGEAEYERMIPKFLQGTEREIPGSVAFRLYDTYGFPLELTEELARES
GLRVDRAGFDTAFQAHQACSRIGAQRVFKGGLADHSAETTAYHTATHLLHQALRVVLGTH
VQQKGSNITAERLRFDFSHPRPMSAQEKVQVEQLVNEQIRADLPVCCEVMSLEDAMNSGA
VALFGEKYESTVKVYSIGTFSREVCGGPHVARTGQLGRFSIQKEQSSAAGVRRIRAILEK
SGEKS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcctattcgcgccgatcagctacgctcgcgttatctcgccttctttagccag
aaggctcatgtggttatctcgggtaagtcccttgtgcccgagcacgatcctaccgtgctt
tttactactgctggcatgcatccgttggttccctatcttatgggtgagccacatccggct
ggtacccgcttggtcaatgcgcaaaagtgtctgcgcaccggtgacatcgatgcggtgggc
gataactcgcatctgacctttttcgagatgttgggtaactggtcgttgggcgattacttc
aaggaggaggcaatcgcgttcagctttgaatttcttactggtgctccatggctcggcata
tcccctgaccggctttcggtgactgtttttgcaggggatgaggctgttgcgcgtgatgag
gaatctgccgctatctgggaacgacttggtatcgcgcgcacccatattcattttttacca
cgtgcggataactggtggggacctacgggggaaacagggccatgtggtccggataccgag
atattctttgatactggagttcctccttgcagtgtgagctgtcgtccgggatgttcttgc
ggcaagtacgtagagatttggaatgacgtgttcatgcagtatcgtaaggacgcagacggc
aggtaccggccgcttgaacgttattgtgtggacaccggtatgggtattgaacgcaccgtc
gcggttttgcagggcaagcggtcagtgtatgatacggagatctttaccccgctcctggag
cggataggtcagttatgtgggaagaggtatgggtgtcagggagcgcacgacgtatccatg
cggattgtatgcgatcatatccgtgcggccacttttatcctcggcgatcctgtccctgta
cgcccatctaacgtgggtgcaggctacgtactgcgcagaatcattcgccgttcagtccgc
cacggaaggaagctcggtatcgatggggagttcctgtcctccctcgcgcgcgtggtgatt
gggcaatacgctgcggtatacccggaactggaagagaaagctacgtgtattgcgcaggag
cttgcaaacgaggaacgtaagttcctcgacgccctcaggaagggtgaggcagagtacgag
aggatgatacccaagtttttacaggggacagagcgagaaatacctgggtcagttgccttt
cggctatacgatacgtatggattcccccttgagctgaccgaggaacttgcgcgtgaatcg
ggtttacgggtggaccgtgcagggtttgacaccgcgtttcaggcgcaccaggcgtgctct
cggatcggtgcacagcgagtatttaagggtgggttggctgatcattcagcggaaacgaca
gcgtaccacacggcgacgcatctgctgcaccaggcattgcgagtggttcttggtacgcac
gtgcagcaaaaaggctcaaatattacggcagaacgcctgcgtttcgacttttctcaccca
agaccgatgagtgcgcaggagaaggtgcaggtggaacagttggtgaatgagcagatccgg
gcagacttgccggtgtgctgtgaagtgatgtcgctcgaagatgcgatgaattctggtgcc
gtggcgttgtttggtgagaaatacgaatcaactgtaaaggtgtactccataggaactttt
tctcgggaagtgtgtggcggtccacatgtagcacgtaccgggcagctcgggcggttttct
attcaaaaggaacagtcgagtgcggcgggggtgcggcgtattcgcgcgattcttgagaaa
agcggggaaaagtcgtaa
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