Thalassoglobus polymorphus: Mal48_02910
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Entry
Mal48_02910 CDS
T09805
Symbol
rhlE_1
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tpol
Thalassoglobus polymorphus
Pathway
tpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mal48_02910 (rhlE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpol03019
]
Mal48_02910 (rhlE_1)
Enzymes [BR:
tpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mal48_02910 (rhlE_1)
Messenger RNA biogenesis [BR:
tpol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mal48_02910 (rhlE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Utp25_C
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QDT31060
UniProt:
A0A517QHG5
LinkDB
All DBs
Position
complement(332399..333715)
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AA seq
438 aa
AA seq
DB search
MKTFAELNLIAPLQRALADENYETPTPIQAQTIPVALEGRDVLGSAQTGTGKTAAFSLPI
LNQLGRTNRKAVSKRPHALILAPTRELAVQIGDSIATYGRHLRLRHVLVYGGVSQRDQVR
KLKRGAHILIATPGRLLDLMNQGHIELNQLECFVLDEADRMLDMGFLPDLKRIIRELPEK
RQSLFFSATLPPKIIELSQSLLVEPATVDVTPEKTNVEKIAQRVLHMDRGRKQNMLQTIL
NGDDVEQALVFTKTKRTADMVTERLQDRDVKATSIHGNKSQNARQRALNAFKRKHVKVLV
ATDVAARGIDVDGITHVINYDIPLEAEAYVHRIGRTGRAGADGIAISFCSSEERRLLHVI
EQFIGQKVPVDPEFPAPQRRERQGGSPSRRRGKSSSNNRPAKRRSADSAATPDGKPKRKY
HSKKKPFKKGPKAKHTPS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacgtttgcggaactgaatctcattgctccattgcaacgtgcactggcagatgaa
aactacgaaacaccaacccccattcaagcgcaaaccatcccggttgctcttgaaggacga
gacgttctcggctctgcccagacaggaacagggaaaacggcagccttttcactgccaatc
ctgaaccaactcggtcgcacaaatcgaaaagctgtttcgaaacgaccacacgctttaatc
ctcgcccccacacgtgaactcgctgtccaaatcggcgatagcattgcgacttatggtcgt
cacctgcgattgcgacacgtcctcgtttacggaggagtctctcaacgcgaccaggtccgg
aagctcaaacgtggagctcatatcctgatcgcaacaccaggtcgcctgctcgacctgatg
aaccagggacacattgaactgaaccaacttgaatgcttcgttctggatgaagcggatcgc
atgctggacatgggattcctgccagacttaaagcgaatcatccgagagcttcctgaaaag
cgacagtcactgttcttctcagcaacgctcccccccaagatcatcgaactctcgcaaagc
ctgcttgttgaaccggccactgtcgacgtgactccagaaaagacaaacgtcgaaaaaatc
gcgcaacgagtcctccacatggaccgtggtcgaaagcagaacatgctgcagacgatcctc
aatggtgacgatgtcgaacaagctcttgtcttcacaaagacaaagcgaaccgctgacatg
gtaactgaacggttgcaagaccgtgacgtgaaagcgacatcaatccatggaaacaaatca
cagaacgctcgccaacgtgcactgaacgccttcaaaaggaagcacgtcaaagtcttggtt
gcaaccgatgtcgcagcccggggaatcgacgtcgacggcatcactcatgtcatcaactac
gatatcccgctcgaagcggaagcctatgtccaccgaattggacggaccggacgcgctgga
gcagatggaattgcaatttcattctgcagcagcgaagaacgtcgcctgctacacgtcatc
gagcaattcattggccagaaagttccagtcgatccagagtttcccgcacctcaacgacga
gaacgccaaggtggctctccgtcacgtcgacgcggaaaatcttcatctaacaaccggcca
gcaaaacgccgatcggcagactccgcagcgacgccggacggaaaaccaaaaagaaaatac
cactcaaagaaaaaaccattcaagaagggtccgaaggcaaaacacacaccttcttaa
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