Thalassoglobus polymorphus: Mal48_03980
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Entry
Mal48_03980 CDS
T09805
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
tpol
Thalassoglobus polymorphus
Brite
KEGG Orthology (KO) [BR:
tpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpol03032
]
Mal48_03980 (ihfB)
03036 Chromosome and associated proteins [BR:
tpol03036
]
Mal48_03980 (ihfB)
03400 DNA repair and recombination proteins [BR:
tpol03400
]
Mal48_03980 (ihfB)
DNA replication proteins [BR:
tpol03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Mal48_03980 (ihfB)
Chromosome and associated proteins [BR:
tpol03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Mal48_03980 (ihfB)
DNA repair and recombination proteins [BR:
tpol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Mal48_03980 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Mnd1
SelB-wing_2
TBPIP
CagA_N
Motif
Other DBs
NCBI-ProteinID:
QDT31166
UniProt:
A0A517QHQ5
LinkDB
All DBs
Position
complement(472474..472953)
Genome browser
AA seq
159 aa
AA seq
DB search
MTKKEIVKTISEECGLTQLKTKEIVQKTFEAIIDTLVAEGRIELRNFGVFEVKKRAARKA
RNPRSGDRVDVPEKFVVTFKPGKEMEERVLQIPVESAEPHQPVKQEDTGISSPPPQASPP
IRPSPTPESQTPSVGIPPSPASPTPHTPASPYPPPGGQP
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaagaaagaaatcgtcaagacaatctccgaagagtgtggcctgactcaactcaaa
acaaaagaaatcgttcagaaaacttttgaagcgattatcgatacgttagttgctgaaggt
cgcatcgaactgcggaactttggtgtctttgaagtgaagaagcgtgctgcgcgaaaggca
cgtaatcctcgctctggagatcgtgttgatgtccctgaaaaatttgttgtgacattcaaa
cccggtaaggagatggaagaacgggtcttgcagatcccggtcgagtcagctgagccgcat
caacctgttaagcaggaagatacgggaatctcatcgcctcctcctcaggcaagtccaccc
attcgaccttccccaacgccagagtcacaaacaccttcagttggaatcccgccttcaccg
gcctcaccaacaccccacactccagcgtcaccatatcctcctccgggaggacagccttag
DBGET
integrated database retrieval system
