Thalassoglobus polymorphus: Mal48_38800
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Entry
Mal48_38800 CDS
T09805
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tpol
Thalassoglobus polymorphus
Pathway
tpol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mal48_38800 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpol03021
]
Mal48_38800 (rpoC)
03400 DNA repair and recombination proteins [BR:
tpol03400
]
Mal48_38800 (rpoC)
Enzymes [BR:
tpol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mal48_38800 (rpoC)
Transcription machinery [BR:
tpol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mal48_38800 (rpoC)
DNA repair and recombination proteins [BR:
tpol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mal48_38800 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Peptidase_M23
BSH_RND
Motif
Other DBs
NCBI-ProteinID:
QDT34617
UniProt:
A0A517QSQ8
LinkDB
All DBs
Position
complement(4996088..5000434)
Genome browser
AA seq
1448 aa
AA seq
DB search
MSVGEGAYDRVNDYGAVKISLASPHDIRSWSFGEVKKPETINYRTYRPERDGLFCERIFG
PEKDWECACGKYRGMKYKGMICDRCGVKVTHSRVRRKRMGHIELAAPVVHIWFFKSMPSR
LGAMLAMKTTSLEKVVYFQEYVVTDPGDTPLRKCQLLTEDEAKEAREKYGAGEFKIEMGA
EAIFSLLTNINLVEESVTLRQELRETGSQQKTKDLIKRLKVIEALRDSENRPEWMVLHCV
PVIPPDLRPLVMLESGNFATSDLNDLYRRIINRNNRLKKLVDLNAPEVIVRNEKRMLQQS
VDALFDNGRCKRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVDYSARSVIVVGPELQ
LHQCGLPKKIALELFQPFIIRRLKELGHADTIKSAKRMLERRDEEVWDILDEVITNHPVL
LNRAPTLHRMGIQAFEPVLVEGHAIRVHPLVCKGFNADFDGDQMAVHLPLSIEAQVEATT
LMMSTNNVFSPANGDPIISPSQDIVMGCYYCTMRRPGRRGEGLVFASPDECMTAYQQGVV
ERHAAVKVRLPKDKRVKGEGAESFKSGGLVETSPGRVMFNDILPRNMAFYNKTLSSKDLS
NVISDCHLEVGRRETIELLDLMKNIGFTESTRSGLSFGTTDLVVAPNKEQVILKGETEVL
KQQKLYDRGVITGAERYNKVIDIWTHAREEITEVMKTELENDVREDGAYVNPIHLMAESG
ARGGVEQIRQLSGMRGLMAKPSGEIIETPIKSNFREGLTVLEYFSSTHGARKGLADTALK
TADSGYLTRKLADVCQNLVITMNDCQTTNGVTRGILYRGEKVEVSLADAIRGRTSRTNIV
DPITDEVIVREGELITVDISRRIEDMGLERIQVRSPMACEAELGLCQKCYGMDLSTGRLV
EEGLAVGIIAAQSIGEPGTQLTMRTFHIGGVAQGDVEESDMKTRKAGRVKFARIRSVINT
EGQAIVLARQGEIVIIDPKNRELERYNVPAGSMLRVKEDEDVKVDQVLCEWDPHSVPILA
EVGGRVRFEDLIEGRSIRSEKDASGFVRSTVIEHKGDLHPQIVLEDSTGKILDYYYLPER
ANIEVKEGGQVSAGAVLAKQPREASGTQDITGGLPRVTELFEARKPKDPAVVAEIDGEIE
LVPERKRGKRVIVVHGQDGTDAEHSIPHGKALLVHSGDLVTAGDALVRGPLVPHDILRVS
GEEAVHQYLLHEIQNVYRAQRVGIDDKHIELVVSQMLRKVRIDDVGDTDLLPGVIVDKWE
FRRVNRELMNCVRITDSGATEFVVGDVVPLETVEEVNDQLEADGEDVIEFTRPRPASAST
QLLGITKAAVQSESFISAASFQETTKVLTEAALAGKSDQLVGLKENVILGHLIPAGTGFK
LHQESEVRIRPEAQQELREEHARVLAARREMLSENEELGGMHPGREAPQPPPPALGDIPS
FTDLSPDD
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcggagaaggtgcttacgatcgcgttaacgactatggtgccgtgaagattagt
ctcgcgagtccgcacgatattcgtagctggtcgttcggtgaagtcaaaaaaccggaaaca
atcaactatcggacctatcgacctgagcgcgatggtttattctgtgaacgtatttttggt
cctgaaaaggattgggaatgtgcttgcgggaaatatcgcgggatgaaatacaaggggatg
atctgcgaccgctgcggcgtcaaagtgactcactctcgtgttcgtcgtaaacgaatgggc
catattgaactggctgcgccagttgtacatatctggttcttcaagagtatgcccagtcgt
ctgggtgcgatgctcgcgatgaaaacgaccagcctggaaaaggttgtttactttcaggaa
tatgttgtcaccgatcctggggatactccacttcgtaaatgtcagttgctgacagaagac
gaagcgaaagaagcccgtgaaaaatatggtgctggcgaattcaaaattgagatgggtgcg
gaagcgattttctcgctgctgacgaacatcaatctcgttgaagagtctgtcacacttcgg
caggaacttcgcgagaccggatcacagcaaaagacgaaggacctgattaagcggctgaag
gtcatcgaagcgctccgagacagtgagaaccgtcctgagtggatggtgctgcactgtgtc
ccagtgattccaccagacttgcgtccattggtgatgcttgagtcaggcaattttgcaaca
agtgatttgaacgacttatatcgtcgaattattaaccggaataaccggttgaaaaaactt
gtcgacctcaatgctccagaagtgattgttcgcaacgaaaaacgaatgttgcaacagtca
gttgatgcactgttcgacaacggtcgttgtaagcgtcctgtcctgggatcatcgaaccgt
ccgttgaaatcactgacggacatgatcaaaggtaagcagggtcgtttccgtgagaacctg
ctcggaaaacgtgtcgattattccgcacgttccgtgattgtggtcgggccggaacttcag
ttgcaccaatgtggtttgccgaagaagatcgctctggaactgttccaaccgtttattatt
cgccgcctgaaggaactggggcacgctgatacgatcaagtctgccaagcgaatgcttgag
cgtcgtgatgaagaggtttgggatattctcgacgaggtgattacaaatcatccggtcctt
ctgaaccgtgcaccaacattgcaccgtatgggaattcaggcatttgagccggttctcgtg
gaaggtcacgcgattcgagtccatccacttgtctgtaaaggattcaacgctgatttcgac
ggcgatcagatggctgtccacttgccgctttctattgaagcgcaagttgaagcgacaact
ctgatgatgtcgacgaacaacgtcttcagtccggccaacggcgacccgattatttcgccg
tcacaggatatcgtgatgggttgctactactgcaccatgcgtcgccctggtcgtcgtggc
gaaggtcttgtctttgcatctcctgatgagtgtatgactgcctatcaacagggtgtcgtc
gagcgacatgctgctgtgaaagtgcgtcttcctaaagacaagcgggtgaaaggcgaagga
gccgagagctttaagtctggtggtcttgtagagacatctcctggtcgagtcatgtttaat
gacatccttccgaggaacatggcgttctacaacaagacgcttagtagtaaagatctttct
aacgttatttctgactgtcacctggaagttggacgtcgagaaacgattgaacttctcgat
ttgatgaagaatatcggtttcacagaatcgactcgttcgggactttcattcggaacaaca
gatctcgttgttgcaccgaataaagaacaggtgattctcaaaggtgaaacggaagttctg
aagcaacagaagttgtacgatcgtggtgtgatcaccggagcagaacggtacaacaaggtg
atcgatatctggactcatgctcgggaagaaattaccgaagtgatgaagacagaactggag
aacgacgtccgtgaagatggtgcctatgtgaatccgattcacttgatggccgagtctggt
gctcgtggtggtgtcgaacagattcgtcagctttccggtatgcgtggtctgatggccaag
ccgagtggtgagatcatcgagacacctattaagtcgaacttccgtgaaggattgacggta
ctcgagtacttctcatcgactcacggtgctcgtaaaggtctggctgataccgctttgaaa
actgcggattctggttacttgacacggaaactggctgatgtttgccagaaccttgttatc
accatgaatgattgccaaacgactaacggcgtgactcgcggaattctttaccgtggggaa
aaggtcgaagtcagtctagctgatgcgattcgtggtcgaaccagtcgaacaaacatcgtc
gatccaattacggacgaagtgattgttcgtgaaggggaattgatcaccgtcgacatttcg
cgacgcattgaagatatgggactggagcgtattcaggtccgcagcccaatggcatgcgaa
gctgaacttggtctgtgccaaaaatgttacggaatggacctctcaacaggtcggttggtc
gaagaggggctggcggtcggaattatcgctgctcagagtatcggggaaccgggaactcag
ttgaccatgcggacgttccacatcggtggtgtggctcaaggggatgtcgaagaaagtgac
atgaagacacgtaaagctggtcgtgtgaaatttgcacggatccgcagcgtgatcaacacc
gaaggtcaggcaatcgttctggctcgacagggtgaaatcgtcatcatcgacccgaaaaat
cgtgaacttgaaaggtacaatgtgcctgcaggttcaatgttgcgggtcaaagaagatgag
gatgtcaaagtcgatcaggtactttgtgaatgggatccgcactcggtgcctattcttgct
gaagtcggcggacgtgttcgctttgaggatttgatcgaaggtcgttcaattcgttcggag
aaagatgccagcggttttgtgcgatccactgtgattgaacacaaaggggatctgcatccg
caaatcgttcttgaagatagtaccgggaaaattctcgactactactacttgcctgaacgt
gcaaacattgaagtgaaagagggtgggcaagtttcagctggagctgtgcttgcgaaacaa
cctcgtgaagcttctggaactcaggacatcacaggtggtctacctcgtgtgactgaattg
ttcgaagcacggaaaccgaaggatcctgcggttgttgcagagatcgatggtgaaattgaa
cttgttcctgaacgcaaacgtggcaagcgtgtgatcgtggttcacgggcaggatggaacc
gatgccgagcattccatcccgcatggtaaggctttgctggttcactctggcgatcttgtg
actgctggtgacgcactggttcgtggtccattggtgccacacgatattctgcgagtgagt
ggtgaagaggcagttcatcaatacctgctccatgaaattcagaatgtgtaccgagctcag
cgtgtgggaattgatgataagcatatcgagcttgtcgtttcacagatgctccgcaaggtt
cgaatcgacgatgtgggagatactgatctgctcccaggtgtgattgtcgataagtgggaa
ttccgacgcgtcaaccgtgagttgatgaattgtgttcgaattaccgattcgggagcgact
gagttcgtcgtgggcgatgtggtccctctcgaaactgtcgaagaggtgaatgatcaactc
gaagctgatggtgaagatgtgatcgaattcacccggcctcgtcctgcaagtgccagcact
cagttgttgggaatcacaaaagcagctgttcagagcgaaagctttatctcagctgcaagt
ttccaggaaacgaccaaagtgctcaccgaagctgcgttggcagggaagtcagatcaactt
gttggtctgaaagaaaacgtgattcttggtcacttgattccggcgggaaccggattcaaa
ttacaccaggaatcggaagtgcgaattcgtcccgaagctcagcaggaattgcgagaagag
catgctcgtgtccttgcagcacgtcgagaaatgctcagcgagaacgaagaactcggtggc
atgcatccgggaagagaggctcctcagcctccgcctccagcgttgggtgacattccttca
ttcactgatctgtcaccggacgattaa
DBGET
integrated database retrieval system
