Thalassoglobus polymorphus: Mal48_39920
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Entry
Mal48_39920 CDS
T09805
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tpol
Thalassoglobus polymorphus
Pathway
tpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mal48_39920 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpol03019
]
Mal48_39920 (rny)
Messenger RNA biogenesis [BR:
tpol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mal48_39920 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
PKK
KH_KhpA-B
dUTPase
KH_2
ZapG-like
DUF883_C
HDOD
KH-I_KHDC4-BBP
DUF5714
Spore_YhcN_YlaJ
Sema4F_C
Motif
Other DBs
NCBI-ProteinID:
QDT34720
UniProt:
A0A517QSW0
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Position
complement(5140357..5141898)
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AA seq
513 aa
AA seq
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MPPYVAAGIALVVGVAIGFFLDRMRMGSAYRNRDELLKDAEREAENMRRTQELEAKEEFL
KRREELDKELDLHRDKLRQQERVLDKKENSLADHEENLKKRERMVEQTQNRIADRSKLIE
KKESDLDKIIEEEQEKLYTISGLSKEDATERLLMRLDKQLKSETGSLILKHQQQLKQDSE
KLAREIIGMAIQRFASDHTSETTVSTIDIPSDEMKGRIIGREGRNIRAFEKETGVDVIVD
DTPGVVVVSAFDTVRREIAKISLNKLIQDGRIHPARIEEVVTETKTEMDERIMDLGHRAA
DEAGVPNLHEKLIYLMGRLNFRVSYSQNVLQHSIEVAHLTAMMAEQLGLDADIARRCGFC
HDIGKAADHEMEGGHPAIGADFLKRYGEGEEVVHAAAGHHDDIRPEYIYTVLTAAADACS
ASRPGSRRETLEKYIKRLEELEAIACGFPGVNEVYAIQAGREVRVIVDPKRVKDREAAKM
ARDIAQAVEETMTYPGEVKVVVMREIRTIGVAR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcccccttatgtcgctgctgggattgcacttgtggtcggagttgcaatcggctttttt
cttgaccgcatgcgcatgggaagcgcctatcgcaatcgcgatgaacttcttaaagacgca
gagcgcgaagctgagaacatgcgtcgcactcaagaactcgaagcgaaagaagagtttctc
aaacgccgcgaagagctcgataaagaactcgatctccaccgagacaaactccgtcagcaa
gaacgtgtcctcgataaaaaagagaactcgctggctgatcatgaggagaatctgaagaag
cgggagcgaatggttgagcaaactcaaaaccgaattgctgaccgcagcaagctaattgag
aagaaagaatctgacctcgataagattatcgaagaggagcaggagaagctttatacgatc
agtggattgtccaaagaagatgcgactgagcgtttgctcatgcgtctcgataagcagttg
aaaagcgaaaccggaagtttaattctcaagcatcagcaacagttgaagcaggattccgaa
aagctggctcgtgaaattatcggtatggcaattcaacggttcgcttctgatcacacttca
gaaacaactgtctcgacgatcgacatccctagtgatgaaatgaaaggccggatcattggc
cgcgaaggtcgtaacattcgagccttcgagaaagagaccggcgtcgatgtgattgtcgat
gatacgcccggtgtggttgtcgtttcagctttcgacaccgttcgtcgagagatcgccaaa
atttcgctcaacaagctgattcaggatggtcggattcacccagcccggattgaagaagtt
gtaaccgaaacgaaaacggagatggatgagcggatcatggatctggggcatcgtgctgcc
gatgaagcaggcgttccaaacttgcatgaaaaactcatctatctgatgggacgcttgaac
ttccgtgtcagttacagccagaacgtgttgcaacactccatcgaagtggctcacttaact
gcaatgatggctgagcaacttggactcgatgcagacattgcccgacgttgtgggttctgt
cacgatatcggaaaagcagcagaccatgaaatggaagggggacaccccgccatcggtgct
gacttcctcaagcgttacggtgaaggggaagaagttgtccacgctgcggctggtcatcat
gatgatatccgaccagagtacatttatactgtgctgacggcagccgccgatgcctgctct
gcttcacgtccaggctctcgtcgtgaaactttggagaagtacatcaaacgactggaagaa
ctcgaagcaattgcctgcggtttccccggcgtcaacgaagtgtacgcaattcaggcgggc
cgtgaagtccgtgtgattgtcgatccgaaaagggtcaaagaccgtgaagctgcgaagatg
gctcgcgacatcgctcaggcagtcgaagaaacgatgacttatccaggcgaagtgaaagtt
gtcgtgatgcgagagattcgcacaatcggagtcgcacgctaa
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