Tenacibaculum polynesiense: T19A14A_2221
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Entry
T19A14A_2221 CDS
T11463
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tpoy Tenacibaculum polynesiense
Pathway
tpoy03030
DNA replication
tpoy03430
Mismatch repair
tpoy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T19A14A_2221
03430 Mismatch repair
T19A14A_2221
03440 Homologous recombination
T19A14A_2221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpoy03032
]
T19A14A_2221
03400 DNA repair and recombination proteins [BR:
tpoy03400
]
T19A14A_2221
Enzymes [BR:
tpoy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T19A14A_2221
DNA replication proteins [BR:
tpoy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T19A14A_2221
DNA repair and recombination proteins [BR:
tpoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T19A14A_2221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAL2111107
LinkDB
All DBs
Position
T190130A14A:2325692..2326789
Genome browser
AA seq
365 aa
AA seq
DB search
MYAILDIETTGGKFNEEGITEIAIYKFDGHQVVDQFIGLINPEKEIQEFVVKLTGINNKM
LRNAPKFYEVAKRIVEITTDCIIVAHNASFDYRVLKNEFSKLGYEFKRNTLCTVTLSKKL
IPDAPSHSLGKLCRHLGIPVADRHRANGDAMATVKLFKLLLEKDVEKEILQESIKYFDKR
EVKQKIDKILDKLPERQGLFYVHNEEGNIIFIGRGTNLKYEANKLFLKTTRKAEKILKRL
HDITFEETGNLLFTRLKYYLELERLKPKYNIIRKRKHNLNGFNHSDMIIMDKGRIPEENA
VILIENNEVIGYAFTNLAYQENKLDVLRSMLTPIEHKQLSKTIIKNYLLKNKVSKIIRLE
VENNL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaattttagatattgaaacgacaggtggaaaatttaatgaagagggaattaca
gaaatagccatatataaatttgatggtcatcaagtagttgaccagttcataggacttatt
aatcccgagaaagaaattcaagaatttgttgtaaaacttaccggaataaataataaaatg
cttcgtaatgctcctaagttttatgaagtagctaaacgtattgttgaaattactacagat
tgtattattgtagctcataatgctagttttgattatagagttttaaagaatgaatttagc
aagctcggttatgaattcaaacgaaatacattatgcaccgttaccctgagtaaaaaatta
attccggatgctccttctcatagtttagggaaattatgcagacatcttggaattcctgta
gcagatcgccatagagctaatggtgatgccatggctactgtaaaactttttaaattactc
ttagaaaaagacgttgaaaaagaaattcttcaagaatctatcaagtattttgacaaacga
gaagttaaacaaaagatcgataagatattagataaactaccagaaagacaaggacttttt
tatgttcataatgaagaagggaatattatttttataggaagaggaaccaatttaaaatat
gaagccaataaactttttttgaaaaccactcgtaaggcagaaaagattttaaaaaggcta
cacgatattacttttgaagaaaccggaaatctattatttacgcgtttaaaatattattta
gagttagaaagacttaagcctaaatataatatcattagaaagcgtaaacacaatcttaat
ggttttaatcatagtgatatgattataatggataaaggaagaattccggaagaaaatgca
gtcattttaattgaaaacaatgaagttattgggtatgcttttaccaatttagcttatcaa
gaaaataagttagatgtattaagatctatgctaactcccattgaacacaaacaactttct
aaaactatcattaaaaattacttacttaaaaataaggtgtctaaaatcattagattagaa
gttgaaaataatttgtaa
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