Tenacibaculum polynesiense: T19A14A_3076
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Entry
T19A14A_3076 CDS
T11463
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tpoy Tenacibaculum polynesiense
Pathway
tpoy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpoy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T19A14A_3076 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpoy03019
]
T19A14A_3076 (recQ)
03400 DNA repair and recombination proteins [BR:
tpoy03400
]
T19A14A_3076 (recQ)
Enzymes [BR:
tpoy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T19A14A_3076 (recQ)
Messenger RNA biogenesis [BR:
tpoy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
T19A14A_3076 (recQ)
DNA repair and recombination proteins [BR:
tpoy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
T19A14A_3076 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
CAL2112598
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All DBs
Position
T190130A14A:complement(3299897..3302023)
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AA seq
708 aa
AA seq
DB search
MVIFANMMQITERDLLEKLKSNFGYDSFRLEQQKIIENVLDKNDTLVIMPTGGGKSICYQ
LPALFLKGITLVISPLIALMKDQVDSLKANGISAAFYNSTQTEEEQREVFDGIANNTLNL
LYVAPESLPLLQDVLNQNYISCVAIDEAHCISAWGHDFRPSYKQLSFLKKTLPNVPIIAL
TATADRATQEDILEQLSIPKAVKFVSSFNRENIRLEVRPANERVQQIVKFIKARPQESGI
VYCLSRKTTEQLATKLKQNGIDAKAYHAGLNLEERTKTQEDFVKDDVQIICATIAFGMGI
DKSNVRWVIHYNMPKNIEGYYQEIGRSGRDGLPAHALLFHSYADVIQLKQFISNTGNKEV
QEAKLDRMKQFAEATVCRRKILLSYFGELIEENCGNCDVCKNPPQFFDGTIIAQKALSAV
YRLQQKEAMGTVIDVLRGAKNANVLDKNYQTLKTYGAGAGVSWRDWQHYIIQLINQGYIQ
IAFHLNNVLQLTEFSKKVLFEGEKIALTTPVEIKKEVKEILKTRKTKTKTSDTLFERLRK
LRYRIAQEEDIAAYLVFSDATLQEIERERPQTDDDFLAISGVGQRKLEVYGGEFIEEIKT
FLNEKKRKKKDTTLETFNLYKEGFSVDEIAVKRNLKPQTIFSHLSKLYLDGKDVSLDEFI
EADVVKQIANAKKVLGNEMALKPYFEFLGEKVPYEQIRIGLTILQKKK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggttatttttgccaacatgatgcagattacagagagagatttattagagaaacttaaa
agcaattttggttacgatagttttagactagaacaacaaaagattattgaaaatgtattg
gataagaacgatacgttagtcataatgcccacaggaggaggtaaatctatttgttatcaa
ttaccagcgctatttcttaaaggaattaccttggtaatatctccattaattgctctgatg
aaagatcaggtagatagcttaaaagctaatggtatttcggctgcattttacaacagtacg
caaaccgaagaggaacaaagagaggtttttgacggaatagctaataacactctcaatttg
ctctatgtcgctcctgagagtttaccgttactccaagatgtattgaatcaaaattatatt
agttgtgttgctatagatgaagcacattgtatttctgcatggggccatgattttagaccg
tcttacaaacaactttcttttttaaagaagaccttacctaatgttcctattattgcttta
actgcaactgccgatagagctacacaagaagatattttagagcaattatcaataccaaaa
gcagtaaagtttgtaagctcatttaaccgagaaaatataagattagaagtcagaccagcc
aatgaacgagtacagcaaattgtaaaatttattaaagcaagaccccaagagtctggtatt
gtatactgtttgagtagaaaaactacagaacaacttgcaaccaaactaaaacaaaatggg
attgatgcgaaggcctatcatgccggattgaatcttgaagaaagaactaaaacacaagaa
gattttgtaaaagatgatgtgcaaattatttgtgcaactattgcttttggtatgggaata
gataaatctaatgtacgttgggttattcattacaatatgcccaaaaatattgaaggatat
taccaagagattggacgttcaggaagagatggattgccagcccatgctttactttttcac
agctatgccgatgttattcagttaaagcagtttatatcgaatacaggaaacaaagaagta
caagaagccaaattagatcgaatgaaacagtttgctgaagcaactgtttgtagacgtaaa
atattgttgagctactttggagagctgattgaagaaaactgtgggaattgcgatgtatgt
aaaaaccctccacaattctttgatggaactattattgctcaaaaagcgttgtcggcggtg
tatagattgcaacagaaagaggcaatgggtacggttatagacgttttaagaggagctaaa
aatgccaatgttttagataaaaattatcaaactctaaaaacgtatggtgcaggtgcagga
gtttcttggagagattggcaacattatataattcagttaataaatcaagggtatattcaa
attgcctttcatttgaataatgtgttgcagttaactgaattctcaaaaaaagtattgttt
gaaggggaaaaaattgcattaacaacaccagtagaaattaagaaagaagtaaaagagata
ttaaaaacacgtaaaacaaagacaaaaacatcagatactttgtttgaacgattaagaaag
ttgaggtatcgtattgcccaagaagaagatatagctgcttatttggtgtttagtgatgct
actttacaggaaatagaaagagaacgaccacagacagatgatgattttttagcaataagt
ggagtaggacagcgtaagcttgaagtttacggtggagagtttatagaagaaataaagaca
tttttaaacgaaaagaaacgtaagaaaaaggacactactctagaaacatttaatctttac
aaagaaggattttctgtggatgaaatagcagttaagagaaatttaaaaccacaaactata
ttttcgcacttgtctaaactatatctagacggaaaggatgtgagtttagatgaatttata
gaggcagatgttgttaaacagattgccaacgctaaaaaggtattaggaaatgagatggca
ttaaaaccatattttgaatttttaggagaaaaggttccgtatgaacaaattcgtattggg
ttgaccattttacaaaagaaaaaataa
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