Tenacibaculum polynesiense: T19A14A_3426
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Entry
T19A14A_3426 CDS
T11463
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tpoy Tenacibaculum polynesiense
Pathway
tpoy03030
DNA replication
tpoy03430
Mismatch repair
tpoy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T19A14A_3426
03430 Mismatch repair
T19A14A_3426
03440 Homologous recombination
T19A14A_3426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpoy03032
]
T19A14A_3426
03400 DNA repair and recombination proteins [BR:
tpoy03400
]
T19A14A_3426
Enzymes [BR:
tpoy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T19A14A_3426
DNA replication proteins [BR:
tpoy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T19A14A_3426
DNA repair and recombination proteins [BR:
tpoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T19A14A_3426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Intimin_C
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
CAL2113272
LinkDB
All DBs
Position
T190130A14A:3657740..3662113
Genome browser
AA seq
1457 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTDNWPRAIQIAWQLHDEMGNLIEHNDFLINPEGFNIPY
DAERIHGISTDLAIEQGISLNEGLDLFNEALKKTKFIVGQNVGFDVNIMGCEFHRLGVEN
NLTELPVLDTCTEHTAQLCQIPGGRGGKFKLPTLTELHNHLFGTGFGEAHNATADVEATT
RCFLELIRLRQYTEEQLDVPNDYFQRYSEANPMPIKVIGLKHLNLKEESDKIRKRKASES
DAETTHSTSEGLAALEGAQFAHLHNHTQYSVLQSTIQIGNIVNAAGKDNMSAVAMTDTGN
MMAAFHFVQAVFGHNKSVEAANKEAIEKGEEPTQKPLKPIVGCEFNICGDHTNKSQKDNG
YQVVLLAKNKNGYHNLAKMSSIAFVDGFYYVPRIDKEVVKKYKEDVIVLTGNLYGEVPSK
ILNVGEAQAEEALLWWKEEFGDDLYIELMRHNQEDENVVNKTLLEFSKKHDVKIVASNNT
FYLDKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNDEYYFKSTEEMKHLFADLPEA
ILNIQEIVDKVEPFTLARDVLLPAFDIPEEFRDDKDLEDGGKRGENNFLRHLTYEGAKIR
YGELTDSICERLDFELDVIAKTGYPGYFLIVEDFIREARKMDVSVGPGRGSAAGSVVAYC
LWITNIDPIKYDLLFERFLNPERVSMPDIDIDFDDEGRSRVMDYVIDKYGANQVAQIITY
GTMAAKSSIRDTARVLDLPLFEADRIAKLIPGMKLKKIFSLDDAGLKAKLRSEEIEMVNE
LKSISNGNGLEAETINKARILEGSVRNTGIHACGVIITPDDITKFVPVSLAKDSDMYVTQ
FDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKARHGVELDPENFPIDDEETYALFQRGE
TVGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFIRRKHGDEEITYDLP
ALEEYLAETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQIAVLAKMKPKFVEQA
MANGHDEKALEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNNM
NDIKSVSFFMEECKRMGLEVLGPDINESFSKFSVNKEGAVRFGMAAIKGVGASAVKAIID
ERKENGNFTSVFDVAKRVDLRVANKKAFEGLILAGGFDSFANTHRAQYFEEDEKSQKFIE
KALRFGNKFQENQNSSQVSLFGEASAVDLPEPIIPECETWGTMELLAREKEVVGMYISAH
PLDDFKNEMKFCNATLTHFKDLAKYEGLALSFGGIITDVQHRVSKAGKGWASFIIEDYTD
SFEFRIFGEEYLKFKHFLVPSSFLFVKTTVKPGWTNKEGVKGDPRVSFIEFNLLHDIMDK
MCKKITIKMPLNEVNENRIKELQHLFATNKGSQNLNFTIWDAEEKIELSLPSRTTKIKIS
NEFLKALDEQFINYKLN
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgatactgaaacaacgggattacctaaaagttggaacgctccaatt
acagatacagataactggccaagagcaatacaaattgcatggcagttacatgatgaaatg
ggtaatttaattgagcataacgattttttaattaatccggaagggttcaatattccatat
gatgcagaacgtattcatggaatttctacagatttagccattgagcaaggtatttcttta
aacgaagggttagacctttttaatgaagctttaaaaaaaaccaagtttattgttggacaa
aatgttggctttgatgtcaacatcatggggtgtgaattccatcgtttaggcgttgaaaac
aacttaaccgaattacctgtattagatacctgtaccgaacatacggctcaattatgtcaa
atacctggtggtagaggaggaaaatttaaactacctacacttacagaattacacaaccat
ttattcggcactggttttggagaagcacataatgcaactgccgatgtagaagctaccact
cgttgtttcttagaacttattaggttacgtcaatatacagaagagcaactagacgtccct
aatgattattttcagcgctattcggaagccaacccaatgcctattaaagttatcggatta
aaacacttaaatctaaaagaagaaagtgataaaattcgaaaacgaaaagcgtcagaatca
gatgctgaaactacgcatagtacatctgaaggattggctgccttagagggtgctcagttt
gcacaccttcataaccacacgcaatattcggtgctccaatcaaccattcaaattggaaac
attgtaaatgccgctggaaaagacaatatgtctgccgtagccatgaccgataccggtaat
atgatggcagcgttccactttgtgcaggctgtatttggacataacaaatcagtagaagcc
gccaataaagaagctattgaaaaaggtgaagagcctacgcaaaaacctttaaaacctatt
gtaggttgtgaatttaatatctgtggagatcatactaacaaaagccaaaaagacaacggg
tatcaagtagttttactagcaaaaaacaaaaacgggtaccacaacttagcaaaaatgtct
tccattgcctttgttgatggattctattatgttccaagaattgacaaagaggttgtaaaa
aaatataaagaagacgtaattgttttaacaggaaatttatacggagaagttcctagtaaa
atattaaatgtaggagaagctcaagcagaagaagccttactatggtggaaagaagagttt
ggagatgatttatatattgagttaatgcgtcataatcaggaagacgagaacgtagttaac
aaaacacttttagaattttcaaaaaagcacgatgtaaaaattgttgcctctaacaacact
ttttatttagataaagaagatgccaatgcacatgatattttattatgtgtaaaagatggt
gaaaaacaagctaccccaattggtagaggacgtggatatagatacggacttccaaacgac
gaatactactttaagtctacagaagaaatgaagcatttatttgctgatttacctgaagcg
atccttaatattcaggaaattgtagataaagtagaaccttttaccctagcacgtgacgta
ttattacctgccttcgatattcctgaagaatttagagatgataaagatttagaagacgga
ggaaaacgaggtgaaaataacttcttacgacacttaacctacgaaggggctaaaattcgt
tatggcgagttaaccgatagtatttgcgaacgtttagattttgaattagacgttattgca
aaaacaggatatccgggttatttcttaattgtagaagactttattagagaagctcgtaaa
atggatgtgtcggttggacccggtcgtggttctgcagcaggttctgtggtagcgtactgt
ttatggatcaccaatattgacccaattaagtacgatttactttttgagcgtttcttaaat
cctgaacgtgtatccatgcccgatattgatattgactttgatgatgaaggacgaagtcgt
gtaatggattatgtaattgataaatacggtgccaatcaagtagcacaaattatcacttat
ggtaccatggcagcaaaatcatctattcgtgatactgcccgtgtactagatttaccatta
tttgaagccgatagaattgccaagttaatccctggtatgaagcttaaaaaaatcttctct
ttagatgatgccggattaaaagccaagcttcgttcagaagaaatagaaatggtaaacgag
cttaaatctatttctaatggaaatggattagaagccgaaactattaataaagcccgaatc
ttagaaggttcggttcgaaatacaggaattcatgcctgtggggtaattattactccagat
gatattaccaaattcgtacctgtttctttagccaaagattccgacatgtatgttactcag
tttgataactcggtagtggaaagtgcgggattactaaaaatggatttcttggggttaaaa
acattaacccttatcaaagacaccgtaaaaattgtaaaggcacgtcatggagtagaacta
gatccagaaaacttcccgattgatgacgaagaaacctatgcattattccaacgtggagaa
accgtagggatattccaatatgaatctcccggaatgcagaaatacatgcgtgaattaaaa
ccaacagtttttgccgatttaattgccatgaacgccctgtatcgtccaggtccgttagaa
tatattccttccttcattagaagaaagcatggagacgaagaaattacctatgacttaccg
gccttagaagaatatttagcagaaacctacggaattacggtataccaagagcaggtaatg
ctactttctcaaaagttagcagattttaccaaaggtgaggccgatgtacttcgtaaggca
atgggtaaaaaacaaattgccgtactagcgaaaatgaagcctaagtttgtagaacaagct
atggcaaatggacatgatgaaaaagcgcttgaaaagatttggaaagactgggaggcattt
gcatcttatgcctttaacaaatcgcactctacctgttatgcatggattgcatatcaaaca
gcatatttaaaagcacattaccctgctgaatatatggctgcagtactatctaacaacatg
aacgatattaaatcggtttctttctttatggaagaatgtaaacgtatgggattagaagta
cttggaccagatattaacgaatctttctctaaattctccgtaaataaagaaggagctgtt
cgttttggaatggcagcaatcaaaggagttggagcctctgccgtaaaggctattattgat
gaacgtaaagaaaacggaaactttacttctgtttttgatgttgctaagcgagtagaccta
agggttgccaataaaaaagcctttgaaggtttaatcttagcaggtggatttgattctttt
gccaatactcatagggcacaatactttgaagaagatgagaagagtcaaaaattcatagaa
aaagccttgcgttttggtaataagtttcaggaaaaccaaaactcatcacaagtatcgttg
tttggagaagcttccgcagtagacttaccggagcctatcattccagaatgtgaaacatgg
ggtaccatggaactcttagcacgagaaaaggaagtggtaggaatgtatatttctgcacat
ccgttagatgactttaaaaacgaaatgaagttttgtaacgctaccttaactcactttaaa
gatttagctaaatatgaaggtttagctctttcatttggaggtattataactgatgtacaa
caccgtgtatctaaagcaggaaaaggttgggcttcttttattattgaagattataccgac
agttttgagtttagaatttttggagaagaatatttaaagttcaaacacttcttagtacca
agttcattcctatttgtaaaaactacggtgaaaccaggatggactaacaaagaaggtgta
aaaggagacccaagagttagttttattgagtttaacttacttcacgacattatggataaa
atgtgtaagaaaattaccattaaaatgcctttaaatgaagtgaatgaaaatagaattaaa
gaactacaacatttatttgctaccaataaaggaagtcagaatttaaactttaccatttgg
gatgctgaagagaagatcgaattgagtttacctagtagaactactaaaattaaaatatct
aacgagttcttaaaagcattagacgaacagttcattaattacaaactgaactaa
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