KEGG   Treponema pallidum subsp. pallidum SS14: TPASS_0251
Entry
TPASS_0251        CDS       T00716                                 
Name
(GenBank) DNA-binding protein II
  KO
K04764  integration host factor subunit alpha
Organism
tpp  Treponema pallidum subsp. pallidum SS14
Brite
KEGG Orthology (KO) [BR:tpp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpp03032]
    TPASS_0251
   03036 Chromosome and associated proteins [BR:tpp03036]
    TPASS_0251
   03400 DNA repair and recombination proteins [BR:tpp03400]
    TPASS_0251
DNA replication proteins [BR:tpp03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    TPASS_0251
Chromosome and associated proteins [BR:tpp03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    TPASS_0251
DNA repair and recombination proteins [BR:tpp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      TPASS_0251
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 HTH_29
Other DBs
NCBI-ProteinID: ACD70678
UniProt: A0A0H3BHY7
LinkDB
Position
264112..264429
AA seq 105 aa
MKRVRRTRSFVVDALCDEVDLSRRHVARVVDSFVSVVTAALERGETVELRDFGVFESRVR
KASVGKSIKTGEVVSIPSHCVVVFRPSKRLKSAVRGYRSGEVGAD
NT seq 318 nt   +upstreamnt  +downstreamnt
gtgaagagagttaggagaacgcggtctttcgttgtcgatgcactttgtgacgaggtggat
ttgagccgtcgccatgtcgcgagggttgttgatagctttgtctctgtggtaaccgctgca
ttggaacggggggagacagtcgagctgagggattttggggtgtttgagtctcgcgtgcgt
aaggcttccgtcgggaagagcataaagacaggggaggtggtctctattccaagtcattgt
gtggtagtgttccgccccagcaagcgtttaaagagtgcggtgcggggatatcgttcgggg
gaggttggtgcggattga

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