Candidatus Tremblaya princeps PCVAL: TCP_025
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Entry
TCP_025 CDS
T01858
Symbol
dnaE
Name
(GenBank) DNA polymerase III, subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tpq
Candidatus Tremblaya princeps PCVAL
Pathway
tpq03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TCP_025 (dnaE)
03430 Mismatch repair
TCP_025 (dnaE)
03440 Homologous recombination
TCP_025 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpq03032
]
TCP_025 (dnaE)
03400 DNA repair and recombination proteins [BR:
tpq03400
]
TCP_025 (dnaE)
Enzymes [BR:
tpq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TCP_025 (dnaE)
DNA replication proteins [BR:
tpq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TCP_025 (dnaE)
DNA repair and recombination proteins [BR:
tpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TCP_025 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AEK38399
LinkDB
All DBs
Position
18504..21749
Genome browser
AA seq
1081 aa
AA seq
DB search
MTEGCSTAPLGCSCGVDFVHLRLHSEFSMHDGMVRVEDAVRAARADMQSALALTDLNNVC
GAVKFYRAAVRSGVKPIVGCNLLLRGAFGETSSVLALARSGGGYRNMCRILTAAWGDAAT
CVEARVDMRWLAGSPRILKGIVVLSGALEGQIGRHIIAGNYSAARRSVDDWLTLTQGSFY
LELQRCGHSGTEAYVHRALELSLYARVPVVATHPIQFMAPSDYPLHCVRCGMAAGALGAR
ATGIFTREQHFKSRESMSRIFLDIPSAIANTCAIARMCNLHMDIGRLRRPVFAGCSPCNE
ASALACTLGTGMRSRMMDGRMPRCTGQRREYAARIREEYRIVAGMGFCGYFLIVADFVGW
ARARGIPVGSGRGSGAGSIMAYMLGITDIDPIEHGLLFERFLNPERVTMPDIDIDFCQEG
RDRVVQYVRRRYGSVAQITTFGTMAARAAVREAARAMGVSYTLADSIARLVPIRPGARVT
IPNSLKEVRMLRSRYASEGDVRLLIDTASRMEGLVRNMAVHAGGVIIAPADIQDLCPLYQ
QAGSIVPVSQLDKDDAESLGLVKFDFLGLTTLTILSCAARGVVGTGRAVSPHSLCGQPCD
SAAFGLLQAADTVAVFQLEGLGMQEALRTTMPDRLGDIIALISLYRPGPMHLVRSYCRRK
HGVEAAGVVDARLQPILGETYGVMVYQEQVMRIAQTMGGYTPGEADLLRRVMSRKQPRDM
AEHRISFVNGAARLGIGRSSALAVFDHMEKFASYGFNKSHAAAYATMSYQTAWVKARHPV
EFMAANMSWSLGGDDRLRQLRLDCARRGVPLRAPDVNRPSYRFTPITCDRIEGHAYIVYG
LGAVKCGGEAVVRDIARCREDRPFRSMYDFLARINSRIVKRGAVECLIKAGAFDCAHGGA
RATMLEALPAAMLDRHEPTALLLRSPKPTSAACLSAAGAWRFAVQHEMEALGYYFSIHPF
SRCRGAARAIATMGIDAIRRRARSHATITMCGVALSMGARSGPEGHSGMVVIEDDSERCP
VYCATRYVAGPVLIRSPLVVTGRVYVSNDRERLSVTALRLGGIDTGALLYRAPVQGIYRI
P
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgacggagggttgctctacagcaccgctgggctgctcttgcggcgtagactttgttcac
cttcgtctgcactctgagttctctatgcacgacggcatggtcagggtagaggacgcggtt
cgcgcggcgagggcagacatgcagagcgcgcttgcgctaacagacctaaacaacgtctgc
ggagcggttaagttctacagggctgccgtaaggtctggcgtaaagcccatagtgggatgc
aacttgctactacgcggggcgttcggcgagacttcgtccgtgctagccctggccagaagc
ggcggagggtatcgtaacatgtgcaggatactaacagcggcgtggggcgatgctgcgacg
tgcgttgaggctcgtgttgatatgcgctggcttgcaggaagcccacgcattctaaagggc
atcgttgttctttcaggggcgcttgaaggccaaatcggccgccatatcatcgccggcaac
tatagtgcagcacggcgctcagtggatgattggctcacactgacccaggggtccttctac
ctagagctgcagcgctgtgggcatagcggcactgaggcttacgtacatagagccctagag
ctatccttgtacgcaagggttccagtggttgcaacgcaccccatacagttcatggcgcca
tcagactacccgttgcattgcgttcgctgcggcatggctgctggtgcgctgggagcacgc
gctacgggtatctttaccagagagcagcacttcaagagcagggagagcatgtctaggatt
ttcctcgacataccctctgccatcgccaacacgtgcgccatagcgaggatgtgcaacctg
cacatggatattggtaggctaaggcgaccagtgtttgccggttgctccccttgcaatgag
gcatcagcgctagcatgcacgctaggcacaggcatgcgatcgcggatgatggatggtagg
atgccacgctgcacgggccagcgtcgtgagtatgctgctaggattagggaggagtacagg
atcgtcgcaggcatgggcttctgcggttacttcctcatagttgctgatttcgtgggatgg
gctagggctcgtggcatacctgtggggtctggcagggggtctggtgccggatctatcatg
gcgtacatgcttggcataacggacatagaccccatagagcacgggctgctattcgagcgt
ttccttaaccccgagcgcgttacgatgccagatatagacatcgacttctgccaggagggc
cgggacagggtcgtgcagtacgtcaggcgccgctatggcagcgtggctcagataaccaca
ttcggcactatggcagcccgtgctgctgtgcgcgaagctgcgcgggctatgggcgtaagc
tacaccttggccgacagcattgccaggctggtgcctatcaggcctggcgctagggtcacc
ataccgaacagcctcaaggaggtgcgcatgctgaggtccaggtatgcatcggagggagac
gtgaggctacttattgacacggcttccaggatggaggggctggtgaggaacatggcagtg
cacgcagggggcgtcataatagcgccagcagacatacaggacctgtgtccgctctaccag
caggctggtagcattgttcccgtaagccagctggacaaggacgatgcagagtctcttggg
ctggtgaagttcgatttcctggggcttacgacgctcaccatactgagctgcgcagcacgc
ggcgtagttggcacagggcgcgctgtaagcccgcactccctgtgcggccaaccgtgcgat
agcgcagccttcggcctcctgcaggctgctgatactgtggcggtctttcagctagagggc
cttggcatgcaggaggcgcttaggaccaccatgccagacaggctgggagacataatagcg
ctgatatcactgtacaggcctggccccatgcacctggtccgcagctactgcaggcgcaag
catggcgtcgaggcagctggcgtggttgacgcacgcctgcagcctatccttggtgagacg
tacggcgttatggtgtaccaggagcaggtaatgaggatagctcagacaatgggtggatac
accccaggggaagctgacctgctacgtcgagtgatgagcaggaagcagcccagggatatg
gcagagcatagaatatcattcgtaaacggtgctgcaaggctcggcataggaagatccagc
gctttggcggtcttcgaccacatggagaagtttgccagctacggtttcaacaagtcgcac
gccgcagcctatgccaccatgtcctaccagactgcgtgggtaaaggcacgccatccagta
gagttcatggccgcaaacatgagctggtctcttggaggcgacgacagactccggcagctg
cgcctggactgcgcgcgacgtggcgtgccactcagagcccctgacgtcaataggccttcc
tataggtttacacccataacatgcgataggatcgaagggcacgcgtacatagtgtacggg
ttaggtgcagttaagtgcggcggtgaggctgtggtgcgggacattgccaggtgcagggag
gataggccgttcagaagcatgtatgacttccttgcacgcatcaacagtaggatcgtcaag
aggggcgctgttgagtgtctgattaaggccggggcattcgactgcgctcatggtggcgct
agggcgacaatgctggaagcactgcctgccgctatgctcgatcgccacgagcctactgcg
ctgctgttgcgcagtccgaaacccaccagcgcagcttgcctgagtgctgcaggagcctgg
cgctttgctgtgcagcacgagatggaggcgctaggatactacttctcgattcacccattc
agcaggtgcagaggtgcggcaagggctattgctaccatgggcatcgatgccataaggcga
cgcgcgcgctcccatgccactatcactatgtgcggtgtagctttaagcatgggggcaagg
tctggcccagaggggcatagcggcatggttgtcatagaggacgactcagagcgatgcccc
gtatactgcgctacgcgctacgtcgcaggccctgtgttgattagaagtccgctggtcgta
actggcagggtgtacgtatctaacgatagggagaggctgagcgtgacggctctgaggctg
gggggcatcgacactggcgccctgttatatcgggcgcccgtgcagggtatctatcgcata
ccttag
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