Candidatus Tremblaya princeps PCVAL: TCP_035
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Entry
TCP_035 CDS
T01858
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tpq
Candidatus Tremblaya princeps PCVAL
Pathway
tpq03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TCP_035 (dnaQ)
03430 Mismatch repair
TCP_035 (dnaQ)
03440 Homologous recombination
TCP_035 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpq03032
]
TCP_035 (dnaQ)
03400 DNA repair and recombination proteins [BR:
tpq03400
]
TCP_035 (dnaQ)
Enzymes [BR:
tpq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TCP_035 (dnaQ)
DNA replication proteins [BR:
tpq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TCP_035 (dnaQ)
DNA repair and recombination proteins [BR:
tpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TCP_035 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEK38405
LinkDB
All DBs
Position
complement(33162..33842)
Genome browser
AA seq
226 aa
AA seq
DB search
MQTRYVVLDTETTGLSPRYHRLAEVGCVEIACGRITGNYFHAYINPRQRMTRGAQAVHGL
RDEFLATQPAFSAIAQRLLFFLCQSTLVGHNLSFDLNFLDAGLATAGFMPAARYCHGVID
TMCHLAQRGSRRRFSLDACCDMLGVRRGDRARHGALVDAVLLAEAFVVAKRTRPKIGYNC
ATMSLHCCLGLHPGLPEVQPGADDLIAPRRSCTWHKDEGMLYDVAG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcagacacggtacgtagtgctggacactgagaccaccggcctcagccctcgctaccat
aggctggcagaggtggggtgcgtggagattgcatgtgggcgcatcactggaaactacttc
cacgcatacataaacccgcggcagcgcatgactagaggcgcccaggctgtgcatggactg
agggacgagttcctcgctacgcagcctgctttcagcgccattgcccagcggctgctattc
ttcctgtgccaatctacgctagtgggacacaacctgtcattcgatctgaactttctggat
gcagggctcgcaacagctggcttcatgccggctgcgagatactgccacggcgtcatagac
acgatgtgtcaccttgcgcagcgcggcagcaggcgtaggttttcactggatgcctgctgc
gatatgctgggagtacggagaggggatagggcaaggcatggcgccctcgtggacgccgtg
ctccttgcagaggccttcgtcgtggccaagcgaaccagaccaaaaatcggctacaattgc
gccaccatgagcctgcactgctgcttagggctacaccccggtcttcccgaagtgcaacct
ggcgctgatgacctgatagcgccacgacgctcttgtacgtggcataaagacgagggcatg
ctgtatgacgttgcaggctga
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