Tsukamurella paurometabola: Tpau_0009
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Entry
Tpau_0009 CDS
T01228
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tpr
Tsukamurella paurometabola
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpr03032
]
Tpau_0009
03400 DNA repair and recombination proteins [BR:
tpr03400
]
Tpau_0009
Enzymes [BR:
tpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Tpau_0009
DNA replication proteins [BR:
tpr03032
]
Prokaryotic type
DNA Topoisomerases
Tpau_0009
DNA repair and recombination proteins [BR:
tpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tpau_0009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
DUF1002
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADG76663
UniProt:
D5UPB1
LinkDB
All DBs
Position
10151..12217
Genome browser
AA seq
688 aa
AA seq
DB search
MAADNNAGKSGSGNYGADSIKQLEGLEAVRKRPGMYIGTTGPRGLHHMIWEVVDNSVDEA
MAGHATRVDVKLRADGGVEVIDDGRGIPVAMHAKGIPTVQLVLTSLHAGGKFDSDAYAVS
GGLHGVGISVVNALSSRVEVEIDVDGFHWQQNFHWDDAKRDSVAEDLIKGEPTTRTGTTV
RFWADPKVFTETTHYDFETVSRRLQEMAFLNKGLTITLTDERPVAIEVPDEDITEEAPSA
HEEDVAAALAEVAPKKRERIFHYPDGLVDYVKHINARTSKSPIHASIISFEGKEKGHEIE
IAMQWNSGYSESVHTFANTINTHEGGTHEEGFRTALTGVVKAYAKDKKLVKEKDGELSGD
DIREGLAAVISVKVAEPQFEGQTKTKLGNTEVKSFVQKVCREQLQFWFDSNPADAKTIVQ
KAAASAQARLAARKARELVRRKSATDIGGLPGKLADCRSNDPDKCEVYIVEGDSAGGSAK
SGRDSMYQAILPIRGKIINVEKARIDKVLKNTEVQSIITAFGTGIHDEFDIAKLRYKKIV
LMADADVDGQHISTLLLTLLFRFMRPLVEHGHVYLAQPPLYKLKWQKGAEPEFAYSDAER
DALLAEGLKSGKKINKDDGIQRYKGLGEMNAKELWETTMDPTVRVLKQVTLDDAAAADEL
FSILMGEDVVARRSFIARNAKDVRFLDV
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtggcggctgacaacaacgctggaaagtccggttcgggcaactacggcgccgattccatc
aagcagctcgagggcctggaggcggtgcgcaagcgccccggtatgtacatcggtaccacc
ggaccgcgcggcctgcaccacatgatctgggaagtcgtcgacaactccgtcgacgaggcc
atggccggccacgcgacccgggtcgacgtgaagctccgagccgacggcggcgtcgaggtc
atcgacgacggtcgcggcatccccgtcgcgatgcacgccaagggcatacccaccgtgcag
ctggtgctcacctcgctccacgccggcggcaagttcgactccgatgcgtacgccgtctcc
ggcggcctgcacggcgtcggcatctcggtggtcaacgcgctgtcgagccgcgtcgaggtc
gaaatcgacgtcgacggcttccactggcagcagaacttccactgggacgacgcgaagcgc
gactccgttgccgaggatctgatcaagggcgagcccaccacccgcaccggtacgacggtg
cggttctgggccgacccgaaggtgttcaccgagaccacccactacgacttcgagaccgtc
tcgcggcgcctgcaggagatggccttcctcaacaagggcctgacgatcacgctcaccgac
gagcgccctgtcgccatcgaggtgcccgacgaggacatcaccgaggaggcaccctcggcg
cacgaggaggacgtcgccgccgcgctggccgaggtcgcgcccaagaagcgcgagcggatc
ttccactacccggacgggctcgtcgactacgtcaagcacatcaacgcacgcacgtcgaag
tccccgatccacgcctcgatcatctccttcgaggggaaggagaagggtcacgagatcgag
atcgcgatgcagtggaactccggctactcggagtccgtgcacaccttcgccaacaccatc
aatacgcacgagggcggaacccacgaggagggattccgcaccgcgctgaccggcgtcgtc
aaggcctacgccaaagacaagaagctggtgaaggagaaggacggcgagctgtcgggcgac
gacatccgcgagggcctcgccgcggtgatctccgtgaaggtcgccgagccgcagttcgag
ggccagaccaagacgaagctcggcaacaccgaggtcaagagcttcgtacagaaggtatgt
cgggagcagctgcagttctggttcgattcgaacccggccgacgccaagaccattgtgcag
aaggccgccgcctcggcccaggcccgtctcgccgcgcggaaggcacgagagctggtgcgc
cgcaagagcgccaccgatatcggcggcctgcccggcaagctcgcggattgccgcagcaac
gaccccgacaagtgcgaggtctacatcgtggagggtgactcggccggtggttccgccaag
agcggccgcgactcgatgtaccaggcgatcctgcctatccgcggcaagatcatcaacgtc
gagaaggcgcgaatcgacaaggtgctcaagaacaccgaggtccagtcgatcatcacggct
ttcggcaccggtatccacgatgaattcgacatcgctaaactgcgctacaagaagatcgtg
ctcatggccgacgccgacgtggatggccagcacatctcgacgctgctgctgacgctgctg
ttccgattcatgcggccgctggtcgagcacggccacgtgtacctcgcacagccgccgctg
tacaagctcaagtggcagaagggtgccgagcccgagttcgcctacagcgatgccgagcgc
gacgcgctgctggccgagggcctgaagtccggcaagaagatcaacaaggacgacggtatc
cagcggtacaagggcctcggcgagatgaacgccaaggagctctgggagaccacgatggat
ccgacggtgcgcgtgctcaagcaggtgaccctcgacgacgccgccgcggccgacgagctg
ttctcgatcctcatgggcgaggacgtggtggcccgccgttcgttcatcgcccgcaacgcc
aaggacgtgcggttcctcgacgtctga
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