Tsukamurella paurometabola: Tpau_0010
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Entry
Tpau_0010 CDS
T01228
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tpr
Tsukamurella paurometabola
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpr03032
]
Tpau_0010
03400 DNA repair and recombination proteins [BR:
tpr03400
]
Tpau_0010
Enzymes [BR:
tpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Tpau_0010
DNA replication proteins [BR:
tpr03032
]
Prokaryotic type
DNA Topoisomerases
Tpau_0010
DNA repair and recombination proteins [BR:
tpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tpau_0010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
TPD52
Nnf1
Motif
Other DBs
NCBI-ProteinID:
ADG76664
UniProt:
D5UPB2
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Position
12278..14791
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AA seq
837 aa
AA seq
DB search
MTDTTPPTETGGHDRIEPVDIQQEMQRSYIDYAMSVIVGRALPEVRDGMKPVQRRILYAS
YDAGYRPDRSYVKSAKPVAETMGNYHPHGDSAIYDALVRLAQPWSMRYPLIDGQGNFGSP
GNDPAAAMRYTEARLTPLAMEMLRGIDQETVDFAPNYDGKTQEPTVLPARVPNLLMNGSG
GIAVGMATNIPPHNLREIAEAVFWCLENYDADSEATLEACMERVKGPDFPTHGLIVGGQG
IKDAYSTGRGSIRMRGVVEVEEDSKGATELVITELPYQVNPDNLVLSIAEQVRDGKIAGI
SKIEDQSSDRVGMRIVVRLKRDAVAKVVLNNLYKHSQLQTSFGANMLSIVDGVPRTLRLD
QMIRYYVAHQLDVIVRRTKFLLRKAEERAHILRGLVKALDALDEVIALIRASQTTEIART
GLMELLDVDELQANAILDMQLRKLAALERQKIIDELAEIEREIADLKDILDKPERQRAIV
RDELGEIVEKFGDDRRTKIIAADGDVTDEDLIAREDVVVTITETGYAKRTKTDLYRSQKR
GGKGVKGADLKQDDIVRHFFVCSTHDWILFFTTKGRVYRAKAYELPEQSRTARGQHVANL
LAFQPEERIAQVIQIKGYDDAPYLVLATKNGLVKKSRLEDFDSNRSGGIVAINLRDEDEL
VGAALVSSEDDLLLVSKNAQSIRFSATDEALRPMGRATSGVQGMRFNGDDQLLALNVVQE
DTYLLVATSGGYAKRTAMDDYPVQGRGGKGVLTIQFDPKRGDLVGALIVNDETELYAITS
GGGVIRTAARQVRKAGRQTKGVRLMNLGEGTTLLAIARNADETDETSDETEQATTEE
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccaccccgcccaccgagaccggtggtcacgaccggatcgaaccggtcgac
atccagcaggagatgcagcgcagctacatcgattacgccatgagcgtgatcgtgggccgc
gcgctgcccgaggtgcgcgacggtatgaagccggtgcagcgccgtatcctgtacgcgtcg
tacgacgccggctaccgccccgaccgcagctatgtgaagtcggccaagcccgtcgccgag
accatgggcaactaccacccgcacggcgactccgcgatctacgacgcgctggtccggctc
gcgcagccctggtcgatgcggtacccgctgatcgacggacagggcaatttcggctcgccc
ggtaatgatcccgcggccgccatgcgctacaccgaggctcgcctcaccccgctcgccatg
gagatgctgcgcggaatcgaccaggagaccgtcgatttcgcgcccaactacgacggcaag
acgcaggagcccaccgtgctccccgcgcgtgtgcccaacctgctgatgaacggctccggc
ggtatcgccgtcggcatggccaccaacatcccgccgcacaatctgcgcgagatcgccgaa
gcggtgttctggtgcctggagaactacgacgccgactccgaggccacgctcgaggcgtgc
atggagcgagtcaagggccccgacttcccgacccacgggctcatcgtgggtggccagggc
atcaaggacgcctactccaccggccgcggctccatccgcatgcgcggcgtggtggaggtg
gaggaggactccaagggcgcaacggaactcgtcatcaccgagctgccctaccaggtgaac
cccgacaacctcgtgctgtcgatcgccgagcaggtccgggacggcaagatcgccggcatc
agcaagatcgaggaccaatcctccgaccgcgtcggcatgcggatcgtggtgcggctcaag
cgcgatgccgtcgccaaggtggtgctgaacaacctctacaagcacagccagctgcagacc
agcttcggcgccaacatgctgtccatcgtggacggtgtgccgcgcaccctgcggctggac
cagatgatccgctactacgtggcgcaccagttggacgtcatcgtgcggcgcaccaagttc
ctgctccgcaaggcggaggagcgcgcccacattctgcgcggcctggtcaaggcgctcgac
gccctcgacgaggtgatcgcgttgatccgcgcctcgcagacgacggagatcgcacgcacg
ggcctgatggagctgctcgatgtcgatgagctccaggccaacgccatcctcgacatgcag
ctgcgcaagctggcggccctggagcggcagaagatcatcgacgaactcgccgagatcgag
cgcgagatcgccgacctcaaggacattctcgacaagcccgagcggcagcgcgccatcgtg
cgcgacgagctgggcgagatcgtcgagaagttcggcgacgaccgccgcaccaagatcatc
gcggccgacggcgacgtgaccgacgaggatctcatcgcccgcgaggacgtggtcgtcacg
atcaccgagaccggctacgccaagcgcaccaagaccgacctgtaccgcagccagaagcgc
ggcggaaagggcgtcaagggagccgatctcaagcaggacgacatcgtgcggcacttcttc
gtgtgctcgacccacgactggatcctgttcttcaccaccaagggtcgcgtctaccgggcc
aaggcctacgagctgcccgagcagagccgcaccgcacgcggtcagcacgtcgcgaacctg
ctggccttccagcccgaggagcggatcgctcaggtgatccagatcaagggctacgacgat
gcgccgtacctggtgctggccaccaagaacggtcttgtgaagaagtcccgcctggaggac
ttcgactcgaaccgcagcggcggcatcgtcgccatcaacctgcgcgacgaggacgagctg
gtgggtgccgcgctggtctcctccgaggatgatctgctgctggtgagcaagaatgcccag
tcgatccggttctccgcgaccgacgaggccctgcgcccgatgggccgcgcaacctccggt
gtgcaggggatgcggttcaacggcgacgatcagctgttggcgctcaacgtggtccaggag
gacacctacctcttggtggccacttcgggcggttatgccaagcgcaccgcgatggacgac
taccctgtgcaggggcgtggcggcaagggcgtgctgacgatccagttcgacccgaagcgc
ggtgacctggtgggcgcgctcatcgtcaacgatgagaccgagctctacgcgatcacctcg
ggtggcggagtcatccgcaccgccgcgcggcaggtccgcaaggcgggtcgccagaccaag
ggtgtccggctgatgaacctcggcgaaggcactacgcttctggccatcgcgcggaacgcc
gacgagaccgacgagacgagcgacgagaccgagcaggcgaccaccgaggaataa
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