Tsukamurella paurometabola: Tpau_1793
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Entry
Tpau_1793 CDS
T01228
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
tpr
Tsukamurella paurometabola
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpr03016
]
Tpau_1793
Enzymes [BR:
tpr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Tpau_1793
Transfer RNA biogenesis [BR:
tpr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Tpau_1793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ADG78411
UniProt:
D5UMD1
LinkDB
All DBs
Position
1872411..1873922
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AA seq
503 aa
AA seq
DB search
MIDPAQQSRTYEVRTYGCQMNVHDSERLSGLLEDAGYVRADGGEQADLVVFNTCAVRENA
DNKLYGNLSHLAPIKRERPGMQIAVGGCLAQKDRGTVVKKAPWVDVVFGTHNIGSLPTLL
ERARHNEKAEVEIKEALDAFPSTLPARRESAYAGWVSISVGCNNTCTFCIVPSLRGKEVD
RRPGDILAEVHALVDQGVSEVTLLGQNVNAYGVNFADPDLPRDKGAFADLLRACGRIEGL
ERVRFTSPHPAEFTDDVIDAMAETPNICPQLHMPLQSGSDTVLKDMRRSYRSTKFLGILD
RVRERIPHAAITTDIIVGFPGETEEDFQATLDVVEKARFSSAFTFQYSIRPGTPAADLPD
QVPKQVVQERYDRLIALQERITLEENRKQVGRRVELLVALGEGRKDAATKRMSGRARDGR
LVHFAGSTDIRPGDVVEVEITGAAPHHLVADGGVLSHRRTRAGDNVEASITPVTAPVGVG
LGLPPVGRPAPAVEPAATGCSTC
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccccgcccagcagagccgtacctatgaggtccgtacctacggatgtcagatg
aacgtacacgactccgagcgcctctccggcctgctcgaggacgccgggtacgtgcgcgcg
gacggcggcgagcaggccgacctcgtggtgttcaacacgtgcgcggtccgcgagaacgcc
gacaacaagctctacggcaacctcagtcacctcgctccgatcaagcgcgagcggccgggt
atgcagatcgccgtcggcgggtgcctggcgcagaaggaccgcggcaccgtcgtgaagaag
gccccctgggtcgacgtggtcttcggcacccacaacatcgggtccttgcccacgctgctc
gaacgcgcccggcacaacgagaaggccgaggtcgagatcaaggaggcgctcgacgccttc
ccctcgacgctgcccgcccgccgggagagcgcctacgcgggatgggtctccatctcggtg
ggctgcaacaacacctgcaccttctgcatcgtcccgagcttgcgcggtaaggaggtcgac
cgtcggcccggtgacatcctcgccgaggtccacgccctcgtcgaccaaggcgtctccgag
gtcaccctgctcgggcagaacgtcaacgcctacggtgtcaatttcgccgaccccgacctt
ccccgcgacaagggggcgttcgcggacctgctccgcgcgtgcggccggatcgagggactc
gagcgcgtccggttcaccagcccccatcccgccgagttcaccgacgacgtgatcgacgcg
atggccgagaccccgaacatctgcccgcagctgcacatgccgttgcagtccggatccgac
acagtgctcaaggacatgcggcgcagctaccgcagtaccaagttcctcggcattctggac
cgggtccgcgagcgcatcccgcacgcggcgatcaccaccgacatcatcgtcggtttcccg
ggggagaccgaggaggacttccaggccaccctcgacgtggtcgagaaggcccggttcagc
tccgccttcaccttccagtactcgatccggcccggtactccggcagccgacctccccgac
caggtgccgaagcaggtggtgcaggaacgctacgaccggctcatcgcactgcaggagcgg
atcacgctggaggagaaccggaagcaggtgggccgccgcgtcgaactgctggtagcgctg
ggtgagggccgcaaggacgccgcgaccaagcgcatgtccggtcgcgcccgtgacggtcgc
ctcgtgcacttcgcgggaagtacggacatcaggcccggcgacgtggtcgaggtcgagatc
accggcgcggcgccgcaccacctggtcgccgacggtggcgtgctcagtcaccgccgcacg
cgcgcgggcgacaacgtggaggcatcgatcacgccggtcacggcccccgtcggcgtggga
ctcggactcccgccggtcggtcgcccggcaccggccgtcgagcccgcagcgacgggatgt
tcgacctgctga
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