Tsukamurella paurometabola: Tpau_2296
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Entry
Tpau_2296 CDS
T01228
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tpr
Tsukamurella paurometabola
Pathway
tpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tpau_2296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpr03400
]
Tpau_2296
Enzymes [BR:
tpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Tpau_2296
DNA repair and recombination proteins [BR:
tpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tpau_2296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADG78903
UniProt:
D5UQD3
LinkDB
All DBs
Position
complement(2389673..2392984)
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AA seq
1103 aa
AA seq
DB search
MLTVHRSERGDVLVDALAEVLATPGADPFAAEVVAVPARGVERWITQSLAARLGIAANID
FPTPDALVAAAVAAASGIALDDDPWRGERLVWLVLAAVDELAFEPGGEVLARHLGVTRPG
GWAEQPGHRPRRRYPTADMLAGLLRSYGANRPGMLVDWTAGRETDGTGGALPADLRWQAE
LFRRVRDLAGVPSPAERLDAACARLRDEPALVALPSRFSVYGPTRLPADQATVFAALAAH
RDVHLWLPHPSPALWAASRERPSAAVGAAVPRVPGATATNPLLASLGREASELQERVSPV
AGADVHHPAPARPGTLLGRLQAAVAGDAPLPAGTAEPDGTVEFHACHGAARMIEVLRERL
VRLFEDDPTLQPREVLVTCPDIESYAPLIRSAFGQAVSGAGAVESGDPVHPGQRLRVRLA
DRSLRFANPLLDALVTVLELADGRATVAQVLDLAATDPVRRRFRFSDSDIERLREWAGPS
GARWGLDASGRERFGLGGFPQNTLATALDRIVLGVAADETESQWLGLGLPLDDVDSTDID
LVGRFADYLDVLTRATADSRGRRTAQAWAESLNALALAVAAVAPSEGWQVTQAGREIATA
LRGGGDRDLTLPEVRAMLASRLAAKPTRANFRTGELTVCTLVPMRSVPHRVVVLLGLDDE
VFPRSTRYSGDDVLGRTPCVGERDPRAEDRQLFLDAVTSATDRLLVFYTGADPVKGTPRP
PAVPVAELRDATRALLTDSDTTGLEFRHSLQPFDSDNFDPDRFGLTVPFSFDPAAYAGAV
AAGGTPEPPAPFLDGPLAAVIEDVDLESLLRFCEHPVKAFLRQRLGFTVPDQDEELAEAL
TIAPDGLQRWDIGDRMLASALAGVESDRFAAAEMRRGTLPPFALGSAVLDAIAGTVAELS
RVVSPHLTGPATTVDIAVDLGAGRRLVGSVPSVYPGGIVRSSFSRLAPKHRVAAWVSLLA
LAAGGHSERSAVAIGRGRFRGVLTSRLTVPADPVAELRALVDLRDRGLTEPLPLFPSASA
VYAERGIAGDSQQMALDAARGEFESGFGDGKDRSIRYALGESAFDDALGPPRGSEAEFSR
AGTRFGALAARLWVPLLTHEEMN
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgtgcaccgcagcgagcggggcgacgtcctcgtcgacgccctcgccgaggtc
ctcgccacgcccggcgcggacccgttcgccgcagaagtggtcgcggtgcccgcccgcgga
gtggaacggtggatcacacagagtctggccgcgcgtctgggcatcgccgccaacatcgac
ttccccacgccggatgcgctcgtcgccgcggcggtggccgcagcctcgggtatcgcgctc
gacgacgatccgtggcgcggtgagcgcctggtctggctggtgctggcggcggtggacgaa
ctcgccttcgaacccggtggtgaggtcctcgcccggcacctcggtgtcacccgcccgggt
ggctgggccgagcagcccgggcaccggccgcggcgccgctatcccaccgccgacatgctg
gccggactactccggtcctatggtgcgaaccgcccgggcatgctggtcgactggacggcg
gggcgggagaccgacggaaccgggggtgcgttgcccgctgatctgcggtggcaggcagag
ctgttccggcgtgtgcgcgacctggccggtgtccccagccccgccgagcggctcgacgcg
gcctgcgcccggctccgcgacgaacccgccctggtggcgctgccatcgcggttctcggtc
tacggacccacccgtcttccggcggatcaggccacggtgttcgcggcgctcgccgcccac
cgggacgtgcacctgtggttgccgcatcccagtcccgcattgtgggcggcatccagggaa
agaccgagcgcagcggtgggggccgccgttccacgggtgcccggtgcgacggcgaccaac
cccctcctcgcgagcctcgggcgcgaggcgagcgagcttcaggagcgggtgagtccggtg
gccggcgccgacgtccatcacccggcgcccgcgcgtcccggcacgctactgggacggctg
caggcggccgtcgccggggacgccccgctcccggcgggtaccgccgagccagacggcacc
gtcgagttccacgcctgtcatggcgcggcgcggatgatcgaggtactgcgtgagcgcctg
gtgcggctgttcgaggacgatcccacattacagccgcgcgaggtattggtgacctgtccg
gacatcgaaagctatgcgccgctgattcgttcggcattcggacaggccgtctccggtgcc
ggggcggtcgaatccggcgatccggtccatccggggcagcggctgcgggtgcggctggcg
gaccgttcactgcggttcgccaatccacttctcgacgcgctggtcacggtgttggagctg
gccgacggccgcgccactgtggcgcaggtgctcgacctcgccgccactgatcccgtgcgc
cggcgtttccggttctcggactccgatatcgagcggctccgggaatgggccggtccgtcg
ggcgcccgctggggcctcgacgcctcggggcgggaacgcttcgggctcggcggttttccg
cagaacaccctcgcgactgcgcttgaccgcatcgtgctcggcgtggccgcggacgagacg
gagagccagtggctcgggctcggtctgccgctggacgacgtcgattccaccgatatcgac
ctggtggggcggttcgccgactacctcgacgtactcacccgggccaccgcggactcccgc
ggccgacgcacggcgcaggcctgggccgagtcactcaacgccctcgcgctcgccgtggcg
gccgtcgcgccgagtgaaggttggcaggtgacccaggcgggccgcgaaatcgcgaccgcg
ctgcgcggcggcggcgaccgtgacctcacgttgcccgaggtgcgggcgatgctggcctcg
cgactggccgccaaacccacccgggcgaacttccgcaccggtgaactgaccgtgtgcacc
ctggttccgatgcgatcggtcccgcatcgtgtggtcgtgctcctgggtctggacgatgag
gtcttcccgcgcagcacccgctactccggcgacgatgtgctcggccgcaccccgtgtgtg
ggcgaacgggatccgcgcgctgaagaccggcagctctttctcgacgcggtgaccagcgcg
accgaccgactgctggtcttctacaccggcgccgacccggtgaagggaacaccgcgcccg
cccgccgtaccggtcgccgagttgcgagatgccacccgggccctgctgaccgactcggac
acgaccggactggagttccggcattccctgcaacccttcgattccgacaacttcgatccg
gatcgattcgggctcaccgtgcccttctccttcgatccggccgcctatgcgggtgcggtc
gcggcgggcggcacaccggaaccgccggcgcccttcctcgatggtccgctcgccgcggtc
atcgaggacgtggacctcgaatcactgctgcgattctgcgaacacccggtcaaggccttc
ctacgacaacgcctcgggttcaccgttcccgaccaggacgaggagctcgccgaggcgctg
acgatcgcgccggacggcttgcagcgctgggatatcggcgatcgcatgctcgcttccgca
ttggcgggggtggagtccgacagattcgcagcggccgagatgcgccgcggcacgctgccg
ccgttcgccctcggtagcgcggtcctcgacgcgatcgccggcactgtcgccgaactgtcg
cgagtggtctcaccccatctgacgggcccggcgaccaccgttgacatcgcggtcgacctg
ggcgcgggacggaggttggtcggatcggtgccgtcggtgtacccgggcggcatcgtgcgt
tcgtcgttcagcaggctcgcgcccaagcaccgggttgcggcgtgggtgtcactgctcgct
ctggcggcgggcggacattccgagcggtcggcggtcgcgatcggtcgcggccgattccgc
ggcgtgctcacctcgcggctcacggtgcccgcagatcctgtggcggagctgcgcgccctg
gtcgatttgcgcgaccgagggctcaccgagccgctgcccctgttcccttcggcctcggcc
gtctacgccgaacgcggaatcgctggcgattcccagcagatggcgctcgatgccgcgcgc
ggcgagttcgagagcggtttcggcgatggcaaagatcgctccatccgctacgcattgggg
gagtcggccttcgacgacgcgctggggccgccccgcggaagcgaagcggagttctcccgc
gcgggaacccgattcggcgccctcgccgcccgcctgtgggtgccactgctgacccacgag
gagatgaactga
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