Tsukamurella paurometabola: Tpau_2620
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Entry
Tpau_2620 CDS
T01228
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tpr
Tsukamurella paurometabola
Pathway
tpr03030
DNA replication
tpr03430
Mismatch repair
tpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tpau_2620
03430 Mismatch repair
Tpau_2620
03440 Homologous recombination
Tpau_2620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpr03032
]
Tpau_2620
03400 DNA repair and recombination proteins [BR:
tpr03400
]
Tpau_2620
Enzymes [BR:
tpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tpau_2620
DNA replication proteins [BR:
tpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tpau_2620
DNA repair and recombination proteins [BR:
tpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tpau_2620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
MCM10_OB
GLUCM-like_C
Motif
Other DBs
NCBI-ProteinID:
ADG79223
UniProt:
D5US18
LinkDB
All DBs
Position
complement(2717206..2720757)
Genome browser
AA seq
1183 aa
AA seq
DB search
MPAQDSFVHLHNHTEYSMLDGAAKVDPLFAEAKRLGMTAVGMSDHGNMFGASDFYNTAVK
YDIKPIIGIEAYIAPESRFNTKRVRWGDPSQKSDDVSGSGAYTHMTMVAENATGLRNLFK
LSSLASIEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHEQEALEAAAKWQ
EIFGKENFYLELMDHGIDIERRVREGLLEIGRKLGIKPLATNDCHYVTKDKAESHGALLC
IQTGKTLSDPTRFQFDGDGYYLKSAQEMRELWDAQVPGACDSTVEIGERVQSYKEVWEHK
DRMPRFPVPENHTQESFLESEVMDGLNRRFPDGPPPDYVERARYELSVINEMGFPAYFLV
VGDLIAHAHEVGIRVGPGRGSAAGSLVAWALGITNIDPIPHGLLFERFLNPERVSMPDID
IDFDDRRRGEMITYASEKWGSDKVAQVITFGTIKTKAAIKDSARVIYGQPGYSIADRITK
ALPPPIMAKDISVKGITDPAHERYKEAVEVRQLIETDPDVKKIYDMALGLEGLIRNAGVH
ACAVIMSCDPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDALAN
IKHNRGIDLDMDQLPLDDETTYQLLQRGNTLGVFQLDGGPMRDLLRRMQPTKFEDIVAVG
ALYRPGPMGVNAHNDYADRKNGRQQVKPIHPELEEPLAEILSETFGLIVYQEQIMQIAQK
VAGYSLGQADLLRRAMGKKKKEILDEAYGGFQQGMLDNGFSQPAITALWETVLPFAGYAF
NKSHAAAYGLVSYWTAYLKANYPAEYMAALLTSVGDDKDKAAIYLGDCRRLGITVLPPDV
NESFHAFTSVGEDIRFGMGSVRNVGEGVVASIVNTREEKGNFTSFSDYLAKIEVAACSKK
VTESLIKAGGFDSLEHPRKGLFLVHSDAIESVLSTKKAEAVGQFDLFGSMGDEGGGTEPI
DDVFTIKVPDEEWDGKHKLALEREMLGLYVSAHPLDGVEHVIAAQTDTPIPAIVEGDVKD
GTQVTVGGILQSVNRRVNKNGAPFASAQIEDLSGGIEVFFFPQAYAAYGAEVVEDAVVLI
KARVNFRDDKVTLIANDIAPIDLSQIGVAKPLSLTMPTRICTHDKVSALKQVLQRHPGVS
DVHVKLVSGDKATTLRLDDTLRVNQSSSLMGDLKALLGPNCLS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcgcaagattcattcgtgcatctgcacaatcacaccgagtactcgatgctcgac
ggggctgccaaggtcgacccgttgttcgccgaggccaagcggctgggtatgacggcggtc
ggcatgtccgaccatggcaacatgttcggggcgtcggacttctacaacaccgcggtcaag
tacgacatcaagccgatcatcggcatcgaggcgtacatcgcgccggagtcccggttcaac
accaagcgcgtccgctggggcgatccgtcgcagaagagcgacgacgtctcgggttcgggc
gcctacacgcacatgacgatggtggccgagaacgccaccggtctgcggaaccttttcaag
ctcagttccctcgcttcgatcgaggggcaactcggcaagtggtctcgcatggacgccgag
atcatcgccgaacacgccgagggcatcatcgcgaccaccggctgcccgtcgggcgaggtg
cagacccggctgcgattggggcacgagcaggaggcgctggaggccgcggccaaatggcag
gagatcttcggcaaggagaacttctacctggaactgatggatcacggcatcgacatcgag
cggcgcgtgcgcgaggggctgctggagatcggccgcaagctcgggatcaagccgctcgcc
acgaacgactgccactacgtcaccaaggacaaagccgagtcgcacggcgcgctgttgtgc
atccagaccggtaagaccctgtccgatcccacccgcttccagttcgacggtgacggctac
tacctcaagtcggcgcaggagatgcgcgagctgtgggatgcgcaggtgcccggcgcgtgc
gattcgactgtcgagatcggtgagcgggtccagtcctataaggaggtctgggagcacaag
gaccgcatgccgcggttcccggtgcccgagaaccacactcaggagtccttcctcgaatcc
gaggtcatggacggcctgaaccgtcgtttcccggacggtccgccgccggattacgtcgag
cgcgccaggtacgagctctcggtcatcaacgagatgggcttccccgcgtacttcctcgtg
gtcggcgatctgatcgcacacgcacacgaggtcggtatccgcgtgggcccgggccgtggt
tcagcggcgggttcgctcgtggcgtgggcattgggcatcaccaacatcgatccgatcccg
cacggcctgctgttcgagcggttcctcaaccccgagcgcgtctcgatgcccgatatcgat
atcgacttcgatgatcgtcgtcgcggcgaaatgatcacctatgcctcggagaagtggggc
tcggacaaggtggcgcaggtcatcacgttcggcaccatcaagaccaaggccgcgatcaag
gactcggcccgcgtcatctacgggcagcccggttactcgatcgccgaccgcatcaccaag
gcgctgccgccgcccatcatggccaaggacatctcggtcaagggcatcacggacccggcg
cacgagcggtacaaggaagccgtcgaggtccgccagctgatcgagaccgacccggacgtc
aagaagatctacgatatggcgctcgggctcgagggcctgatccgcaacgcgggcgtgcac
gcgtgcgcggtgatcatgtcctgcgatccgctcaccgacgcgatccccgtgtggaagcgc
gcacaggacggcgcgatcatcaccggatgggactatccgtcgtgtgaggccatcggcctc
ctgaagatggacttcctgggcctgcgcaacctcaccgtgatcggcgatgcgctggccaac
atcaagcacaaccgcggcatcgatctcgacatggaccaactcccgctggacgacgagacc
acctaccagctgctgcagcggggcaacacgctcggcgtcttccagctcgacggtggaccg
atgcgagatctgctgcggcgcatgcagcccaccaagttcgaggacatcgtggccgtcggt
gcgctctaccggccgggcccgatgggtgtgaacgcccacaacgactacgccgatcgcaag
aacggcaggcaacaggtcaagccgatccacccggagctcgaggagccgctggccgagatc
ctatcggagactttcggtctgatcgtgtatcaggagcagatcatgcagatcgcgcagaag
gtcgcgggctactcgctcggtcaggccgacctgctgcggcgtgcgatgggtaagaagaag
aaggagatcctcgacgaggcctacggtggcttccagcagggcatgctcgacaacgggttc
tcccaacccgcgatcaccgcgctgtgggagacggtgctgccgttcgccggctacgcgttc
aacaagtcgcacgccgcagcgtacggcctggtctcgtattggaccgcgtacctcaaggcg
aactacccggccgagtacatggccgcgctgctcacctccgtcggcgacgacaaggacaag
gccgcgatctacctcggcgactgccgccgcctcggcatcaccgtcctcccgccggacgtc
aacgagtccttccacgccttcacttccgtcggcgaggacatccgcttcggcatgggctcg
gtgcgcaacgtcggcgagggggttgtcgcgtccatcgtgaacacgcgtgaggagaagggg
aacttcacgtccttctccgactacctcgccaagatcgaggttgcggcctgctccaagaag
gtgaccgaatccctcatcaaggcgggcggtttcgactcgctggagcatccccgcaagggg
ctgttcctggtgcacagcgacgcgatcgagtcggtgttgtccaccaagaaggccgaggcc
gtgggccagttcgacctcttcggctccatgggcgacgagggcggcggtaccgaaccgatc
gacgacgtgttcacgatcaaggtgccggacgaggagtgggacggcaagcacaagctcgcg
ctggaacgcgagatgctcggcctgtacgtctccgcccacccgctcgacggtgtcgagcac
gtgatcgcggcgcagaccgacaccccgatcccggccatcgtcgaaggcgatgtcaaggac
ggcactcaggtgaccgtcggcggcatcctgcagtcggtgaaccggcgcgtgaacaagaac
ggcgcgccgttcgcatcggcgcagatcgaggatctctccggtggcatcgaggtcttcttc
tttccgcaggcctacgccgcgtatggggcggaggtggtcgaagacgccgtggtgctgatc
aaggcgcgggtcaacttccgggacgacaaggtcacgctgatcgcgaacgacatcgccccc
atcgatctgtcgcagatcggcgttgcgaagccgttgtcgctgaccatgccgacgcgaatc
tgcacgcacgacaaggtgtccgcgctcaagcaggtgctccagcggcaccccggcgtctcg
gatgtgcacgtcaaactcgttagcggggataaggccacgacgctgcggctggacgacaca
ctccgagtgaatcagtcgtcatcgttgatgggtgatctgaaggccctgctcggcccgaac
tgcctgtcctga
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integrated database retrieval system
