Tsukamurella paurometabola: Tpau_2680
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Entry
Tpau_2680 CDS
T01228
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tpr
Tsukamurella paurometabola
Pathway
tpr00061
Fatty acid biosynthesis
tpr00071
Fatty acid degradation
tpr01100
Metabolic pathways
tpr01212
Fatty acid metabolism
tpr02024
Quorum sensing
tpr04146
Peroxisome
Module
tpr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Tpau_2680
00071 Fatty acid degradation
Tpau_2680
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Tpau_2680
09145 Cellular community - prokaryotes
02024 Quorum sensing
Tpau_2680
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tpr01004
]
Tpau_2680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpr04147
]
Tpau_2680
Enzymes [BR:
tpr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Tpau_2680
Lipid biosynthesis proteins [BR:
tpr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Tpau_2680
Exosome [BR:
tpr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Tpau_2680
Exosomal proteins of breast cancer cells
Tpau_2680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
ADG79280
UniProt:
D5USK9
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All DBs
Position
2785281..2787086
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AA seq
601 aa
AA seq
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MREISVPANFTIDPDASTVDVVFDAARTDPQSVRVKRLVGQDWKPVTTKQYADEILGVAK
GLIAQGVQPGDRVALVSSTRYEWPVIDFAIWAVGAVTVPVYETSSSGQIDWILQDSDAVL
LIIEGPKQAAEVAELNGKLHNVKRVLQIDAAEGEQGAVAALTAEGAGVTEEQVHAGRAGV
KAADLATLIYTSGTTGRPKGCELMHSNLMSEAEAILASPFGEAIRGGSNVMFLPLAHVLA
RAVNIACFKGGAVVGHFNDTKNLVPQFAIFKPTLILSVPRVFEKVYASAQQSAVDGGKGK
IFDAAAQTAIEYSESLDKGGPGLVLKVKHAVFDKLVYGKLKAALGGNCKVAISGGAPLGA
RLGHFFRGVGVTVMEGYGLTESTAAITVNVEGAQKIGTVGRPLAGQGAKIAEDGEILLQG
SVVFRGYWRNEEATKAALEDGWFHTGDLGSIDEDGFLSITGRKKELIVTAGGKNVSPAGL
EDALRGNPLISQAMVIGDAQPFIAALITIDPEAFPQWKSANGKPASASVADLREDPDLKA
EIDRAVAVANDTVSKAEAIKKVRILPEDFSEETGEMTPTMKVKRNVVTQKYADDIAEIYA
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagatatctgtccccgccaatttcaccatcgacccggatgcgtccacggtggac
gtcgtcttcgatgcggcccgcaccgatccgcagagcgtgcgcgtcaagcggttggtgggg
caggactggaagcccgtcaccacgaagcaatacgccgatgagatcctcggcgtcgcgaag
gggctcatcgcccaaggtgtgcagccgggagaccgcgtcgcactggtctcctcgacccgg
tacgagtggcccgtgatcgacttcgccatctgggccgtcggcgcggtgacggtgcccgtg
tacgagaccagcagctcgggccagatcgattggatcctgcaggattcggacgccgtgctg
ctcatcatcgagggaccgaagcaggccgccgaggtggccgagctcaacggcaagctgcac
aacgtcaagcgcgttctccagatcgacgccgccgagggtgagcagggcgccgtggccgcg
ctcaccgccgagggcgccggggtcaccgaggagcaggtgcacgcgggccgcgccggcgtg
aaggccgccgatctggccaccctgatctacacctcgggcaccacgggccggcccaagggc
tgcgagctgatgcactccaacctcatgagcgaggccgaggcgatcctcgcctctcccttc
ggtgaggcgatccggggtggctcgaacgtgatgttcctgccgctggcgcacgtgctcgcg
cgtgccgtgaacatcgcgtgcttcaaaggcggagccgtggtggggcacttcaacgacacc
aagaacctggtgccgcagttcgccatcttcaagccgacgctgatcctttcggtgccgcgc
gtcttcgaaaaggtctacgcctcggcccagcagagcgccgtggacggcggcaagggcaag
atcttcgacgccgccgcgcagaccgcgatcgagtacagcgaatcgcttgacaagggcggc
cccggcctggtgctcaaggtcaagcatgcggtcttcgacaaactggtctacggcaaactc
aaggccgccctgggcgggaactgcaaggtcgcgatttcgggcggcgcgccgctcggcgcg
cgcctgggccacttcttccggggcgtgggcgtgaccgtcatggagggctacggcctcacc
gagtcgaccgcggcgatcacagtgaacgtcgaaggcgcacagaagatcggcacggtcggc
cggccgctcgccgggcagggcgcgaagatcgccgaggacggcgagatcttgctgcagggc
tccgtggtgttccgcggctactggcgcaatgaggaggccaccaaagccgcgctcgaggac
ggctggttccacacgggcgacctgggttcgatcgacgaggacggtttcctgtccatcacc
ggtcggaagaaggaactgatcgtgaccgcgggcggtaagaacgtctcgccggccggactc
gaggacgcgctgcgtggcaacccgctgatctcgcaggcgatggtgatcggcgacgcgcaa
ccgttcatcgcagcgctgatcacgatcgacccggaagccttcccgcagtggaagtccgcg
aacggcaagcctgcgtctgccagcgtggccgatctgcgcgaagatcccgatctcaaggcc
gagatcgaccgcgccgtggccgtcgccaacgacaccgtctccaaggccgaggcgatcaag
aaggtacgcatcttgcccgaggacttcagcgaggagaccggcgagatgacgccgaccatg
aaagtcaagcgcaacgtcgtgacgcagaagtacgccgacgatatcgccgagatctacgcg
aagtag
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