Tsukamurella paurometabola: Tpau_2686
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Entry
Tpau_2686 CDS
T01228
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tpr
Tsukamurella paurometabola
Pathway
tpr03030
DNA replication
tpr03430
Mismatch repair
tpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tpau_2686
03430 Mismatch repair
Tpau_2686
03440 Homologous recombination
Tpau_2686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpr03032
]
Tpau_2686
03400 DNA repair and recombination proteins [BR:
tpr03400
]
Tpau_2686
Enzymes [BR:
tpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tpau_2686
DNA replication proteins [BR:
tpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tpau_2686
DNA repair and recombination proteins [BR:
tpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tpau_2686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADG79286
UniProt:
D5USL5
LinkDB
All DBs
Position
2792597..2794429
Genome browser
AA seq
610 aa
AA seq
DB search
MQLTLDDCDSPAADPDLREVTFVVVDLETTGGSPKGGDAITEIGAVKVRGGEVLGEFATL
VDPERGIAPHITHLTGITTAMVTGAPTIASVLPAFLEFAQGAVLVAHNARFDIGFLKAAA
AATGTPWPKPQTLCTVQLARRVLTRDEAPSVKLSEMARLFRAETTPTHRALDDARATVDV
LHGLIGRVGNLGIRTFAELRGHLPSVTPQQRAKRGLADPLPERPGVYLFRGPGDEVLYVG
TSRNLRRRVRSYFTSGETRGRIKEMVGLAERVDHVECAHALEAAARELRLIAAHTPPYNR
RSKYPKRGWWICLTVEPFPRLAVKRSAPAGSVCLGPIRSRTEAADLADLIAETCGLRTCT
TRLRPGGAHACALGPDGTRPVGGCHGSVSAPEPASLYRPRADRAAAMLTGRSSAVFDALQ
ARLDSLVEREFFESAARLRDRTAQLVDITLRSHSLAAFAEVPELSIAHPDGAGGWELSIV
RHGRLAAAGVAPRGVPPMPVFDRLRSGAETVYEADAPADQPALFVPDALFPADVLHGASP
EEAALLRRWALQPGTRIVEVRGTWGEPLHGAGRWREWAERALTAGRDARAAASQPQRSGR
QYSEGTTHAA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgacgctcgacgactgcgactcgccggccgccgatcccgacctgcgcgaggtg
accttcgtcgtggtcgacctggagaccacgggaggctccccgaaggggggcgatgcgatc
accgagatcggcgccgtgaaggtacgcggcggcgaggtactcggcgagttcgccactctg
gtcgacccggagcgcgggatcgctccgcacatcacccatctcacgggcatcaccacggcg
atggtcacgggtgcccccacgatcgcgtcggtgctgcccgcattcctcgagttcgcacag
ggagcggtcctcgtcgcgcacaacgcgcgattcgacatcggcttcctcaaagcggccgcc
gccgcgacgggtacgccgtggccaaaaccgcagacgctgtgcaccgtgcagctcgcgcgg
cgggtgctcacccgcgacgaggcaccgtcggtgaagctcagcgagatggcgcggctgttc
cgcgcggagaccactcccacgcaccgcgcgctcgacgacgcccgtgccaccgtggatgtg
ctgcacggactcatcgggcgggtgggcaatctcggcatccgcaccttcgccgagctgcgc
ggtcacctcccctccgtcaccccgcagcagcgtgccaaacgcggcctcgccgacccgctg
ccggaacgccccggggtgtacctgttccgtggtccgggcgacgaggtgctctacgtgggc
acctcccgcaacctgcgccgccgggtgcgcagctacttcacctccggggagacgcgcgga
cggatcaaggagatggtcgggctcgccgagcgcgtggaccacgtggaatgcgcacacgca
ctcgaggccgccgcccgcgaattacggctgatcgcggcccacacgcccccgtacaaccgg
cgctcgaaatacccgaaacgcggctggtggatctgtctcaccgtggagccgtttccccgg
ctcgcggtgaagcgatccgcaccggcggggtccgtgtgcctgggcccgatccgctcccgc
accgaggcggccgacctcgccgatctcatcgccgaaacctgcggcctgcgcacgtgcacc
acccggttacggcctggtggtgcgcatgcctgcgcgctcgggcccgacggtacgcgcccc
gtcggcggctgccacggttccgtcagcgctcccgaaccggcctcgctctaccggccgcgc
gccgaccgggcagcggcgatgctcaccggccgctccagcgccgtcttcgacgccctgcag
gcgcggctcgactcgctcgtcgaacgggaattcttcgaatcggcggcgcgactgcgggac
cggaccgcgcagttggtcgacatcacgcttcgctcacactcgctggcggcgttcgctgag
gtacccgaactgtcgatcgcccatcccgacggcgccggcggatgggaactgtcgatcgtg
cggcacggccggctcgccgccgccggggtggcgccgcgcggcgtaccgccgatgcccgtc
ttcgaccggctgcggtccggtgcggaaacggtgtacgaggcggacgcgccggcggatcag
cccgcgctgttcgtgcccgatgcgctgttccccgccgatgtcctgcacggtgccagcccg
gaggaggccgcattgctgcggcgctgggcattgcaacccggcacccgcatcgtcgaggtg
cgtggcacctggggtgagccgctgcacggagcgggccgctggcgtgagtgggccgagcgt
gctctcaccgccggccgcgatgcccgcgcggcggcatcgcagccgcagcgcagcggcagg
caatacagtgagggcaccacgcacgccgcgtga
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