Tsukamurella paurometabola: Tpau_3030
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Entry
Tpau_3030 CDS
T01228
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tpr
Tsukamurella paurometabola
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpr03400
]
Tpau_3030
Enzymes [BR:
tpr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Tpau_3030
DNA repair and recombination proteins [BR:
tpr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Tpau_3030
Prokaryotic type
Tpau_3030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADG79624
UniProt:
D5UUQ6
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All DBs
Position
3139485..3140840
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AA seq
451 aa
AA seq
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MTVIWWARRDLRLGDNPALCAAAAAGPVLPLVVLDPALLHDGARPREAWYAANVLALDDQ
LGGELCLRSGSPVEEVLAVALETGATAVHVSRETTPFGSRRDASIRDRLAEHGIDWVETG
SPYAVTPGRIVKSDGTPYRVFGAFQRAWREHRWPAPAQLPDRVHWARPPAGGAAERRSLA
AMVEASPVPLPPAGESAALDRWHRFRTDELARYAQDRDRPDHDASSRLSPYLKVGAVHPR
TLLTGLGSSDGAAKYASELCWRDFYADVLYHHPDSLRTDLTKALAGLEYTPPGADFTAWQ
RGATGYPLVDAGMRQLRTEGWMHNRVRMVVASFLSKDLHVWWPHGAAHFLDLLLDGDPAS
NAHGWQWVAGTGTDAAPYFRVFNPTTQAEKFDPRGDYVRRYVPELRHLDGAAALAPWKHT
DGYAHGYPAPIVDHAEERAVTLARYGTVRGK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtgatctggtgggcccggcgggatcttcgcctgggcgacaatcccgcgctgtgc
gcggctgcggcggcggggccggttctgccgctggtggtgctcgatcccgctctgctgcac
gacggtgcgcgtccgcgcgaggcctggtacgcggcgaacgtgctcgccctcgacgatcag
ctgggcggcgagctgtgcctccggtcagggtcccccgtggaggaggtgctcgccgtcgcg
ctcgagacgggagcgaccgcggtacacgtgagccgtgagaccaccccgttcgggagccgt
cgtgatgcgtcgatccgggaccgcttggcggagcacgggatcgattgggtcgagaccgga
tcaccgtacgccgtcactccggggcgcatcgtcaaatcggacggcacgccgtaccgggtg
ttcggcgctttccagcgggcatggcgtgaacaccggtggcccgcacccgcacaactcccc
gaccgggtgcactgggcgaggccacctgccggcggcgcggcggagcgtcgttcattagcg
gcgatggtggaggcctccccggtgccactgccgccggcgggcgagagcgcggcgctcgac
cggtggcaccgcttccgcaccgacgaactggcgcgctacgcgcaggatcgggaccggccg
gatcacgacgcctcgtcgcgattgtcgccgtacctcaaggtgggtgccgtacatccgcgc
accctgctcaccggactcgggtcgagcgacggcgccgcgaagtacgcctccgagttgtgc
tggcgcgacttctacgccgatgtgctctaccaccatccggactcgctccgcaccgatctg
accaaggccctcgccggcctggaatacacgccgccgggcgccgacttcacggcgtggcag
cgcggcgcgaccggatacccactggtggacgcgggcatgcgacagctccgcaccgagggc
tggatgcacaaccgggtacggatggtggtggcgagcttcctcagcaaggacctccacgtc
tggtggccacacggcgccgcacacttcctggacctgctgctcgacggagatcccgcgtcc
aacgcgcacggctggcagtgggtggcgggtaccggcaccgacgccgcaccgtacttccgc
gtgttcaaccccaccacgcaagcggagaagttcgatccacgcggcgactacgtgcgccgg
tacgtccccgaattgcggcatctcgacggtgcggcggcgctcgcgccgtggaagcacacc
gacggctacgcgcacgggtatccggccccgatcgtcgaccacgccgaggagcgcgcggtg
acgctggcgcggtacggcacagtccggggcaagtga
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