Tsukamurella paurometabola: Tpau_3046
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Entry
Tpau_3046 CDS
T01228
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpr
Tsukamurella paurometabola
Pathway
tpr03420
Nucleotide excision repair
tpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tpau_3046
03430 Mismatch repair
Tpau_3046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpr03400
]
Tpau_3046
Enzymes [BR:
tpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tpau_3046
DNA repair and recombination proteins [BR:
tpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tpau_3046
MMR (mismatch excision repair)
Other MMR factors
Tpau_3046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADG79639
UniProt:
D5UUS1
LinkDB
All DBs
Position
complement(3156703..3158796)
Genome browser
AA seq
697 aa
AA seq
DB search
MIEALDPEQQEAVLAPRGPVCVLAGAGTGKTRTITHRIAHQVSTGHVAAGQVLAVTFTSR
AAGEMRARLRGLGIGGGDGTPGVQAVTFHAAAMRQLRYFWPRAVGDTRWELLDNKFPIVG
RAARDCELRPETDTVRDLLAEIDWAKASLVTPETYAQAVEQAGRTAPMAPGTVADVYAAY
ERRKTDQDGNRLLDFDDLILVTAAILEDNAVVADEFRDRYRSFVVDEYQDVTPLQQQLLN
AWLGDRDDLTVVGDANQTIYSFTGATPNYLLDFTRRFEDAVIVRLQRDYRSTPQVVSLAN
KVIGAAQGRVAGTRLELIGQRPDGPSPIYAEADDEPAEAKLVAKRIRELMASGVPASEIA
ILYRINAQSAVHEAALTEAGIPYQVRGGSAFFERPEIGQAVRELMSRAGQFGGISGDELM
SMVEGALEPLGRTTEPPDGARALERWQALNALVELTADLAKQRPGLTLAELIGELRARAE
AKHPPTMEGMTLSSLHAAKGLEWDAVFLVGLTEGSVPIAQAIAKGDPEPIEEERRLLYVG
VTRAREHLHLSWALARNEGGRKTRKRTRFLDVVSAQADAGRPRVADSGPSKGKRRSSDIC
RVCGGILDTREEKLRSRCDDCPSDLNDALVEALKIWRTGQARDQQIPPYTIFSNATLFAI
AEHQPRSRAQLVRINGIGATKAEKYGDEVLALVAEHG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaagcactggacccggagcagcaggaagcggtactcgcaccgcgcggaccggtc
tgcgtgctggcgggcgccggcacgggcaagacccgcacgatcacccaccgcatcgcgcac
caggtctccaccggccacgtcgcggcaggtcaggttctcgccgtcaccttcacctcccgc
gccgcgggggagatgcgggctcggctgcgcggcctgggcatcggcgggggcgacgggact
ccgggtgtccaggccgtcaccttccacgccgccgcgatgcgccagctccgctacttctgg
ccgcgggcagtgggcgacacccgctgggagttgctcgacaacaagttccccatcgtgggc
cgcgccgcgcgcgactgcgagctgcgccccgagaccgacaccgtgcgcgacctgctcgcc
gagatcgattgggcgaaggcctcactggtcacccccgagacctacgcgcaggccgtcgaa
caggccggccgcaccgccccgatggcacccggcaccgtcgccgatgtctacgccgcgtac
gagcgccgcaagaccgaccaggacggcaaccggctcctcgacttcgacgatctgatcctg
gttaccgcggcgatcctggaggacaacgccgtggtcgccgacgagttccgcgaccgctac
cgcagcttcgtggtcgatgagtaccaggacgtcaccccgctccagcagcagctcctcaac
gcctggctgggcgaccgcgacgatctcaccgtggtcggcgatgcgaatcagaccatctac
tccttcaccggcgccaccccgaactacctgctcgactttacccgccggttcgaggacgcg
gtgatcgtccgcctgcaacgcgactatcgctccaccccgcaggtggtctccctggccaac
aaggttatcggcgctgcacagggccgcgtcgcgggcactcggctcgaactcatcggccag
cgccccgacggtccgtccccgatctatgccgaggccgacgacgagcctgccgaggcgaag
ctggtggccaagcgcatccgagaactcatggcctcgggcgtacccgccagcgagatcgcc
attctgtaccggatcaacgcgcaatcggccgtccacgaagccgcgctcaccgaggccggc
atcccgtaccaggtgcggggcggcagcgccttcttcgaacgccccgagatcgggcaggcc
gtccgcgaactcatgtcgcgcgcggggcagttcggcggcatctcgggcgacgagttgatg
tcgatggtcgaaggtgcgctcgaaccgctggggcgcaccacagagccgcccgacggtgcc
cgtgcgctcgagcggtggcaggccctcaacgctctggtcgagctgaccgccgacctcgcg
aaacaacgacccggcctgaccctcgccgagctcatcggtgagctgcgcgcgcgggccgag
gccaagcatccgcccaccatggagggcatgacactttcctcgctgcacgcggcgaaaggc
ctggaatgggacgcggtcttcctcgtcggtctcaccgagggctccgttccgatcgcgcag
gccatcgccaagggagaccccgaaccgatcgaggaggagcgccgcctgctgtacgtgggc
gtcacccgcgcccgcgaacacctgcatctgtcttgggcgctcgcgcggaacgagggtggc
cgcaagacccgcaagcgcacccgcttcctcgatgtggtttccgcgcaggccgatgcgggc
cgtccccgcgtggcggattcggggccctcgaaggggaagcggcgctcctctgatatctgc
cgcgtgtgtggcggcatcctcgacacccgtgaggagaagctgcgctctcgctgcgacgac
tgtccgtccgacctcaacgatgcgttggtcgaggcgctgaagatctggcgcaccgggcag
gcgcgcgaccagcagatccctccgtacacgatcttttccaacgccaccctcttcgcgatc
gccgaacaccagccgcgcagccgtgcgcaattggtgcggatcaacgggatcggtgcgacg
aaggcggagaagtatggcgacgaggtgctggctctcgtcgccgagcacggctga
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