Tsukamurella paurometabola: Tpau_3382
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Entry
Tpau_3382 CDS
T01228
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpr
Tsukamurella paurometabola
Pathway
tpr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tpau_3382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpr03021
]
Tpau_3382
03400 DNA repair and recombination proteins [BR:
tpr03400
]
Tpau_3382
Enzymes [BR:
tpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tpau_3382
Transcription machinery [BR:
tpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tpau_3382
DNA repair and recombination proteins [BR:
tpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tpau_3382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ADG79966
UniProt:
D5UWG7
LinkDB
All DBs
Position
complement(3478199..3479257)
Genome browser
AA seq
352 aa
AA seq
DB search
MLISQRPTLSEEVISDARSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEDDEPVTMYVRKQGPGAVTAGDIVPPASVTVHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLILDVETKNSMTARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIAAFSLPIEDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHALGLALKDSPASFDPSQVDGYDPATGTWSDEPSFSGDADGDQDYAETEQL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcgcagcgacccacgctcagcgaagaggtcatctccgacgcgcgctcgaag
ttcgtcatcgagccgctggagccgggcttcggctacacgctgggcaactcgctccgccgt
acgctgctgtcgtccatcccgggcgcagccgtgaccagcatccgcatcgacggcgtgctg
cacgagttcaccacggttccgggcgtgaaggaggatgtcaccgacatcatcctgaacctc
aagggcctggtcgtctcgtcggaggatgacgagccggtcaccatgtacgtgcgcaagcag
ggtccgggcgccgtcaccgcgggcgacatcgttcccccggcgtcggtcaccgtgcacaac
cccgatctgcacatcgccaccttgaacgacaagggcaagctcgagatcgagctcgtcgtc
gagcggggccgcggctacgtgccggccgtgcagaacaaggcgtcgggcgccgagatcggc
cgtatcccggtcgactcgatctactcgcccgtgctcaaggtgacctacaaggtggaggcc
acccgtgtcgagcagcgcaccgacttcgatcgcctgatcctcgacgtcgagaccaagaac
tcgatgaccgcgcgggacgcgctggcttcggccggtaagaccctggtggagctgttcggc
ctcgctcgcgagctgaacgtcgaggccgagggcatcgagatcggaccgtcgccggccgag
gccgaccacatcgcggcgttctcgctgccgatcgaggacctcgacctcacggtgcgttcg
tacaactgcctcaagcgcgagggtgtgcacaccgtgggcgagctggtggcccgcaccgag
tccgaccttctcgacatccgcaacttcggtcagaagtcgatcgacgaggtcaaggtcaag
ctgcacgcgctgggtctggccctcaaggacagccccgcgtcgttcgatccgtcgcaggtc
gacgggtacgacccggccaccggtacctggagcgacgagccgtcgttctcgggcgacgcc
gatggcgatcaggactacgccgagaccgagcagctctga
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