Tsukamurella paurometabola: Tpau_3879
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Entry
Tpau_3879 CDS
T01228
Name
(GenBank) Integrase catalytic region
KO
K07482
transposase, IS30 family
Organism
tpr
Tsukamurella paurometabola
Brite
KEGG Orthology (KO) [BR:
tpr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Tpau_3879
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Gene cluster
GFIT
Motif
Pfam:
HTH_38
rve
HTH_23
HTH_28
HTH_32
Sigma70_r4
rve_3
Motif
Other DBs
NCBI-ProteinID:
ADG80452
UniProt:
D5UMH8
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Position
complement(4002914..4004287)
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AA seq
457 aa
AA seq
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MHSPMVKKRFFKELDVSDGNVSVAARAAGVTVNTAFGWMRRAGLRGRGSTSNGGHPGRAE
YDRLRREGVLRPDAARRVGVSVRTAGDWDRGVRKIGDTRIHPDGRKIDYLTGAVTWVGVE
SDAPRQRSLHPRFLTLTERETIADMRREGASLRAIGRELGRPASTIKREIDAGVVNGAYR
PHQAHRRWEKSRSRPKPAKLAQAGPLRDYVENKLQDQWSPEQICHSLGTEFPNEQSMRVS
VETIYQSIYVQARGGLRREVAMALRTGRTRRKPHRRAEHRTRRFVDKMVMISDRPAEVED
RAVPGHWEGDLIVGTRSESAIVTLVERSTRYVMLGHLPGGHSAEEVRDVLVSLIGNLPGH
LRGSLTWDQGCEMAAHQQFTVATGVPVYFCDPHSPWQRGSNENTNGLLRQYFPKGTDLSA
YGREDLELVAQKLNRRPRKTLGWKTPAERLRDLITAR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgcattcaccgatggtgaagaagaggttcttcaaggaattggacgtgtctgacggcaat
gtgtcggtcgctgctagggcggcgggggtgacagtgaatacggcgtttggatggatgcgc
agggcgggcctgcgtggacgtgggagcactagcaatggtggtcatcccggccgggccgag
tacgaccggcttcgccgtgagggggtgctgcggccggacgctgctcggcgtgtcggtgtc
agcgttcgcactgctggggactgggatcgaggggtgcgcaagattggcgatactcgtatc
catcccgacggacgcaagatcgattacctgacaggtgcggtcacgtgggtcggagtggaa
tcggatgcaccgaggcagcggagcctgcatccacggtttctgaccttgaccgagcgggaa
actatcgctgacatgcgccgcgagggggcatcgctgcgggccatcggcagggagctcggc
cggccagcatcgacgatcaaacgggagatcgacgctggcgttgtcaacggtgcctatcgc
ccgcatcaggcgcaccgcaggtgggaaaagagccggtcacggccgaagccagcgaaactg
gcccaggccggtccgctgcgggactacgtcgagaacaaactgcaggaccagtggtcccca
gagcagatatgtcactctctagggaccgagttccccaacgagcaaagtatgcgtgtgagc
gtcgagacgatctaccagtcgatctacgttcaggctcggggcggcctgcgccgtgaagtc
gcgatggccttgcgaacgggccgcacccgccgcaagccccaccgccgcgccgaacatcgc
accagacgattcgtcgacaagatggtgatgatctccgaccggcccgccgaggtcgaggat
cgagccgtgccaggccactgggaaggtgacctgatcgtcggtactcgcagcgagtccgcg
atcgtcacactcgtcgaacgctccacccgctacgtcatgctcggccacctgcctggcggc
cactccgccgaagaagtccgtgacgtgctggtttcgttgatcggaaatctcccaggacat
ttgcggggatcactgacctgggaccagggctgcgagatggccgcccaccaacaattcacg
gtcgccaccggggttccggtctacttctgcgatccccactcaccctggcagcgcggaagc
aacgagaacaccaatggactactgcgccagtacttcccgaaaggcaccgacctgagcgcc
tacggccgcgaagacctcgaactcgtcgcccagaaactcaatcgccgaccacgcaaaacg
ctcggctggaagacaccagccgagcgtttgcgtgacctcattacagctcgctag
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