Trifolium pratense (red clover): 123881552
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Entry
123881552 CDS
T08949
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123881552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123881552
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123881552
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
SYNRG_C
Motif
Other DBs
NCBI-GeneID:
123881552
NCBI-ProteinID:
XP_045786222
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Position
LG1:51809942..51814322
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AA seq
265 aa
AA seq
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MANLPPQSPSMKKDESNSSVCSSSTDSTRMMYAKSLVIELSNPDLRENALTVLSKMTDLF
QELAPVLWNSFGIIATFLQEIISIYPAISTPDLTPQQSARVCNVLALLQCVASHPETKIS
FLKANIPIYLYPYLRTTNNSAPYEDLRLASLGVIAATVKVKTREAIGFLLASEVMPLCLQ
SIEVGKELSKTVATFIVEKILSDHVGMAYVCVIPERYHAVTRALDMLASAQNQPSSRLVK
LLVSCYSYLSEKQVMFLPKTIPPPS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctcccccctcaatcaccctctatgaagaaagatgaatcgaattccagtgta
tgttcctccagcactgattccaccaggatgatgtacgcaaaaagtcttgtaattgaattg
agcaatcccgatctacgagaaaatgctcttactgtgctctccaagatgacagatttattt
caagaactcgcgccagtattgtggaattcttttggtattattgcaacatttttacaggaa
ataatttcaatatatcctgcaatttcaactccagatcttactccacaacaatcagctcga
gtatgcaatgtacttgccctacttcagtgtgtggcatcccaccctgagacaaagatatca
tttctgaaagctaacattcctatatatttgtatccctatcttcgcacaacaaacaattcg
gcaccgtatgaggatttgagacttgctagtcttggcgtcattgctgcaacagtgaaggtt
aagaccagagaagccataggtttccttctggcaagtgaagtcatgccgctgtgcctccaa
agtattgaagttggcaaagaactgtcaaaaacagttgcaacatttattgttgagaaaatt
ctgtcagatcatgttggtatggcttatgtttgtgttataccagaacgctatcatgcagta
acccgagctttggacatgttggcaagtgctcagaatcaaccttcatcgcggcttgtgaag
cttttggtttcgtgttatagttatctctcggaaaaacaagtaatgtttttgccgaaaaca
attccaccaccatcttaa
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