Trifolium pratense (red clover): 123881662
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Entry
123881662 CDS
T08949
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03020
RNA polymerase
tpra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123881662
09124 Replication and repair
03420 Nucleotide excision repair
123881662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123881662
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123881662
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123881662
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123881662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
123881662
NCBI-ProteinID:
XP_045786339
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All DBs
Position
LG4:11793392..11796649
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AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHKDPNVLFAG
YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEAELLKFSKDY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacctgatcgttacgagcgtttcgttgtccctgaaggcactaaaaaggtttct
tacgagagagacacgaagattatcaatgctgcatctttcaccattgaaagagaagatcac
actattggcaacatccttcgcatgcagcttcacaaagaccccaatgtgttatttgctgga
tacaagcttccccatcctcttcagtacaaaattattattaggatacacactaccagccag
tcttcaccaatgcaggcatataatcagtctatcaatgatctggacaaggaacttgatacc
ttgaagagtggttttgaggcggagttgctgaagttttcaaaggactattga
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