Trifolium pratense (red clover): 123881946
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Entry
123881946 CDS
T08949
Name
(RefSeq) WD repeat-containing protein 11 isoform X1
KO
K24260
WD repeat-containing protein 11
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123881946
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tpra03037
]
123881946
Membrane trafficking [BR:
tpra04131
]
Endosome - Lysosome transport
Others
Others
123881946
Cilium and associated proteins [BR:
tpra03037
]
Other cilia and associated proteins
Other cilium assembly proteins
123881946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_1st
Beta-prop_WDR11_2nd
TPR_WDR11
WD40_CDC20-Fz
TPR_GEMI5
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-GeneID:
123881946
NCBI-ProteinID:
XP_045786675
LinkDB
All DBs
Position
LG4:complement(42382323..42397274)
Genome browser
AA seq
1329 aa
AA seq
DB search
MLLGNSPRALASPRSQPQSPFSSSSQESWESMLPGPSTRNNFGSSDLSPHGLLAFPSGSS
ISIIDTRSMQLVSSFPIPPPPSSAAPFVTAIRWIPIPLNRHLLSSEPSSSHLLLAAGDRQ
GRIALLDFRLKSAILWFDTDSKTGIQDLCWIHARSDLFILAAITGPSTLSLFNSTTGRCV
WKYDASPEYFSCIRRDPFDARRICAIGLKGFLLSLLHLGDTEESVVIKELQIRTDSSELL
KLERDSAGAASVPASAAFPLYVARFAFSQHWRHILFVTFPRELVVFDLQYERVIFNSALP
RGCGKFLDVLPDPNNEWIYCAHVDGKLSTWRRKPGEQAHIMYSMEELMPSVGTSVPSPSI
LSVVLCQSDTTLQNIGKNYSGIPSSPYLHEDFDNPFDFCDESHIISKIHLISISDDGKLW
DWLLTAEVNADTQKDDKKLGLVNDDSTAALHGANSNTMVSFAGGRELNVGRPLDHLNDNK
SHWPSSTFNHEEISMKISLVGQLQLLSSTVTMLAVPTPSLTATLARGGNYPAAAVPLVAL
GTQSGIIDVVDVSANAVTSSLSVHSGIVRGLRWLGNSRLVSFSYTQANEKSGGYINKLVV
TCLRSGLNKMFRVLQKPERAPIRALRTSSSGRYLLILFRDAPVEVWAMTKNPIMLRSLAL
PFTVLEWTLPTVPRPPKDQTPEASDEASKPSDSKEGSSAEGSQDDTSESFAFALVNGALG
VFEVHGRRIRDFRPKWPSSSFVSSDGLITAMAYRLPHVVMGDRMGNIRWWDVTTGHSSSF
NTHREGIRRIKFSPFVPGDHSRGRIAVLFYDNTFSVFDLDSPDPLANSLLQPQFPGTLVL
ELDWLPLRTDKNDPLVLCIAGADGSFRLVDINVNEKRLGSALLLRKTKERFRAMPICCPI
LLPSPHALALQMILQLGVKPSWFNTCSTTIKKRPHLIPGAPPPTGDLRAYMINVPPLGDS
VVPEMLLKVLEPYRKEGCMLDDERAKLYASIVDKGCAARFAFAATVFGESSEALFWLQLP
QALKHFINKSSRKPPSKGSTKEGFSEVDETSLLSRISSKGKPTEGMQSQGQQKLMAFDQE
ELWKSASERISWHDKLEDEEDMQKRVHELVSVGNLEAAVSLLLSTPPESSYFYVNALRAV
ALSSAVSRSLHELAVKVVAANMVRADRSLSGTHLLCAVGRYQEACSQLQDAGCWSDASTL
AATHLKGSDYARVLQRWAGYVLHSEHNIWRALILYVAAGALQEALAALREAQLPDTAALF
ILACREIHAEIISDLGITDDESSSSVNDRIRNLNALDPKNEDVIVVDEYFVQYQRKLVHL
CMDSHPSYD
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgttattaggaaattctcctagagcattagcatcaccaagatcacaaccacaatcacca
ttttcatcatcatcacaagaatcatgggaatcaatgctccctggtccatcaactcgcaac
aactttggatcttcagatctgagtcctcacggcctcctcgcattcccttccggcagttca
atttccataatcgacactcgctctatgcagttagtttcatctttccctattcctcctcca
ccttcctccgccgcacccttcgtaaccgccattcgctggatccctatccctctaaatcgc
catctcctctcctccgaaccttcctcctctcatcttctcctcgccgccggtgatcgtcaa
ggtcgcattgcgcttctcgattttcgtctaaaatccgcgattctttggtttgatactgat
tctaagacagggattcaggatctttgttggattcatgcacgatctgatttattcatcctc
gctgctattactggaccttctacactttctctctttaattctactactggaagatgtgtt
tggaaatacgatgcttcgccggagtatttctcttgtattcgccgtgatccattcgatgcg
cgtcgcatttgtgcgattggtctcaagggttttctattgtcgttgcttcatcttggtgat
actgaggaaagtgttgttattaaggaacttcagattcgtactgattctagtgaattgctt
aagcttgagagagattcggccggtgctgcttcggtacctgcttctgcggcttttcctctt
tatgtagcgaggtttgcattttctcagcattggaggcacattttgtttgttacatttccg
agggaattggttgtgtttgatttgcagtatgagcgtgtgatctttaattctgctttgcct
cgtggctgtggcaagtttctagacgtgttgcctgatccgaataacgaatggatctactgt
gctcatgttgatggcaagctcagcacatggaggaggaaacctggggaacaagcacacatt
atgtattcgatggaagagttaatgccatctgttggtacctctgtcccttctccttcgata
ctttccgtcgttttatgccaatcagataccactctccagaacattggcaagaattattct
ggcatacctagttctccttaccttcacgaggattttgataatccttttgacttttgtgac
gagtcccacattatttctaagatacatttaatctccatatccgatgatggaaaattatgg
gactggctcttgactgctgaagtgaatgcagacactcaaaaggatgataagaagttgggt
ttggtcaatgatgattccacagcagcattacatggagccaactctaacactatggtatct
tttgctggtggacgggaactaaatgtaggcaggccgctggatcatctcaatgataataaa
agccactggccaagctcaaccttcaatcatgaagaaatttcaatgaagattagcctagtt
ggacagcttcagcttctctcttcaacagtgactatgctggcagtaccaaccccttctctg
actgctactcttgcccgtggaggaaattatccggcagcagctgttcccctggttgctttg
ggaacacagagtgggataatagatgttgttgatgtttctgccaatgctgttacatcaagt
ttatctgtacatagcggtattgttagaggactacgatggctaggaaattccagactggtt
tcattttcttatactcaggctaatgaaaaatctggaggatatattaacaagctagttgtg
acctgccttcgaagtggccttaacaagatgttccgagttttgcaaaagccagaacgtgct
ccaataagagcgttgagaacatcttcatctggaaggtatcttctaattttgtttcgtgat
gcacctgtggaggtttgggcaatgactaagaatcctatcatgcttagatcattagctctt
ccatttacggtattggaatggactcttccaacagttccacgtcctcctaaggatcaaacg
cccgaggcttcagatgaagcatctaaaccatcagattcaaaagaggggtcaagcgcagag
ggatcacaagatgatacttctgaaagttttgcatttgctttggtgaatggggcacttgga
gtttttgaagtgcatggtcgaagaattcgagatttcagaccaaaatggccttcttcgtcc
tttgtatcatcagatggattgataactgcaatggcctaccgcttgccccatgtggtgatg
ggagacagaatgggtaacataagatggtgggatgtgacaactggacattcttcctctttc
aacactcatagagagggaattcgtcgaataaaattctcaccttttgtaccaggggaccat
agccgggggcgtattgctgttctgttttatgataataccttttctgtttttgatttggac
tcgcccgaccccttggccaattcacttttgcaacctcaatttcctggaacccttgtgttg
gaacttgattggttgcccttacgaactgataagaatgatccattggtcctctgcattgct
ggagcagatggtagttttcgccttgttgatattaatgtaaatgaaaaacgacttggttca
gcactcctgctcagaaaaacaaaggagagattccgtgcaatgcctatatgttgtcccata
ctactcccttcaccacatgcattggcactgcaaatgattttgcaattgggcgttaaacct
tcttggtttaatacttgtagtacgaccataaaaaaaaggcctcacttaattccaggagct
cctccaccaaccggggatcttcgcgcatacatgattaatgtaccacctcttggagactct
gtggtgccagagatgcttctgaaagtattggaaccatatcgaaaagaaggttgcatgctt
gacgatgagagagccaagttgtatgctagtattgtggataaaggctgtgctgcaaggttt
gcttttgcagctacagtatttggtgaatcctcagaagctctgttttggctacagcttcct
caagcgcttaaacattttattaataagtcatcgagaaagccaccatcaaaagggtctaca
aaagaagggttctctgaggttgatgaaacatctttactgtctaggatatcatcaaaggga
aaaccaactgaaggaatgcagagtcaaggtcaacaaaaattgatggcttttgatcaagaa
gagttgtggaaaagtgcaagtgagcgtatttcttggcatgacaaattagaagatgaagag
gatatgcagaaacgtgtacatgaacttgtatcagttggaaatcttgaagctgcagttagt
ttattgctttctacacctccagagagttcttacttctatgtcaatgcacttcgtgcagta
gctctctcttctgctgtttcgagatctcttcatgagcttgcagtgaaggtagttgcagcc
aacatggtgagagctgacaggtcactctctggcactcatcttctttgtgcagttggaaga
tatcaagaagcgtgttctcagctacaagatgctggatgctggtcagatgcttcaacctta
gctgctactcacttaaagggatcagattatgcaagagtgttgcaaagatgggctggatat
gtcctgcacagtgaacataatatctggagggctctgattttgtatgttgccgctggtgca
ctacaagaagcattggcagctcttcgcgaggctcagctacctgatacagctgcattgttt
atccttgcatgccgtgaaatccatgcagagattatttctgacttgggtattactgatgat
gaatcaagttcatccgttaatgataggatacgaaacttaaatgctttagatcctaagaat
gaagatgtcattgtagttgacgaatactttgtgcaataccaaagaaaattggtgcatcta
tgcatggattcacatccatcttatgactaa
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