Trifolium pratense (red clover): 123882011
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Entry
123882011 CDS
T08949
Name
(RefSeq) RNA-binding protein 28 isoform X1
KO
K14573
nucleolar protein 4
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123882011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpra03009
]
123882011
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123882011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
123882011
NCBI-ProteinID:
XP_045786744
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All DBs
Position
LG4:37699748..37707897
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AA seq
1001 aa
AA seq
DB search
MGKKNKAMRENSDGTIKQSPLTLFVSNLPYSFTKDQLEETFSEVGPIRRCFMVAQKGSDQ
HRGFGYVHFAVEKDANTAVELKNGSLVGGRKISVKHAIPRPPREKKSKPDQEGKIDDLTE
SKNDDKDNGLSAVEKSVSVPKEESVPKEEGYDFVNVHLISFTSCSFIYLLLFLNIIFSFL
LEVKVLNKPKNSRKPVEIKKAALCNDAADEGGGSEKQKVARTVIFGGLINSAMAEDVHRQ
ARDIGTVCSIKYPLSRNDLQQHGLLQDGCTSDASAVLYTSVKSARGSVAKLHKKEIGGGT
VWARQLGGEGAKTQKWKLIVRNLPFKAKENEIRDAFSSAGSVWEVFIPQKSDTGLSKGFA
FVKFTCKQDAENAIKKLNGSKFGSRLIAVDWAVPKKIFSSDTNDAPASEEGQQKVTDEDD
STTTEDDVEHSDEQSDHGDDSDVDGVVEEDVPSEDDFDKEADIARKVLNNLIASSSAKDV
SANNDSTCSEENKEPKSNETVKGADSKASKESDKVFAISKPGTSSKLSNPKETEDDLQRT
VFISNIPFECDTEEVKQRFSAFGVVEYFAPVLHQLTKRPRGTGFLKFKTVEAADNAISTA
NAASGMGILVKGRPLKVFKALDKKSAHEKELEKEKNEVHDHRNLYLAKEGLILAGTPAAE
GVSASDMAKRKDLERKKKTKLQSPNFHVSKTRLVIYNLPKSMTEKQLKKLCIDAVISRAT
KQKPVIRQIKILKDGRKGKATQEKQFSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHR
PIVEFALDNVQTLKLRNAKLQYQQQAPRDDNRNENDKPDNAGVYTHGADRKRKSQEHDKP
TKDLGLNSNNEQGSKVANGKPPHGDKSKRQKGNHKSTNTDVLSSKESPKASVSKLKNNQD
GQNHGAKLHEGKNTAIDSNSRKISGKKDDAVYGKRKMQNQEQAGEKVSRKRAKKNKDSIG
KDTVDKLDMLIEQYKSKFSQKGSQGNDGEKKPQQLRKWYQS
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaaacaaagcgatgagagaaaatagcgacggcactataaaacaaagcccc
ttaactcttttcgtttcaaatttaccctattcttttacaaaagatcagcttgaagaaact
ttcagtgaagttggacctattagacgttgtttcatggttgcacaaaaggggtctgaccaa
catcgcggtttcggttatgttcactttgctgttgagaaagacgctaacactgctgttgag
ctgaagaatggttcattagttggtggccgaaaaatttcagtgaagcacgcgattcctcgt
ccaccccgtgaaaaaaaatcaaaaccagatcaagagggcaagatagatgatctcacagag
tcaaaaaatgatgataaagacaatggattatctgcagtagagaagtctgtttcagttcca
aaggaagaatcagttccaaaggaagaaggttatgattttgttaatgtgcatttgattagc
tttacaagctgctcatttatatatttattgctttttcttaatatcatattttcatttctt
ttagaagtgaaagttttgaataaaccgaaaaattcaaggaagcccgtggaaataaaaaaa
gcagctctttgtaatgacgcagcagatgaggggggtggctcagaaaagcagaaggttgct
aggactgttatatttggtggtctcattaattctgctatggctgaagatgttcaccgccaa
gccagagatattggaactgtgtgttctatcaagtatcccctttcaaggaatgatcttcag
caacatggtctgctgcaagatgggtgtacttcagatgcttcagctgtactatatacaagt
gtaaaatcagctcgtggttccgttgcaaaattgcataaaaaagagataggaggtggaact
gtttgggcacgacagcttggcggtgagggcgccaagactcagaaatggaagcttattgtc
agaaaccttcctttcaaggccaaagaaaatgaaataagagatgcattttcatctgcgggg
tctgtatgggaggtattcattccacagaagtccgacacaggtctttcaaagggttttgca
tttgtaaaattcacctgcaagcaagatgctgaaaatgccattaaaaaactcaatggatca
aagtttgggagtcgtctcatagctgttgactgggctgttccaaaaaagatatttagtagt
gataccaatgatgctcctgcttcagaggaaggacaacaaaaggtgacagatgaagatgat
agtactactactgaggatgatgttgagcatagtgacgaacaatctgatcatggagatgat
agtgatgttgatggtgttgtggaggaagatgttccttctgaagatgattttgacaaggaa
gcagacattgcaagaaaggttcttaacaacttgattgcgtcctcctctgccaaagacgtg
tctgcaaataacgattctacatgttctgaagaaaataaggagccaaaatctaacgaaact
gttaagggcgcagatagtaaagcatctaaagagtctgacaaggtttttgctatttctaag
cccgggacttccagcaagttatctaatcctaaggaaacagaagatgatttgcaaagaaca
gtttttataagcaatattccctttgaatgcgatactgaagaagtgaagcaacggttttct
gcatttggagtagtagaatattttgctcctgttctccaccaattgaccaagcgtccacga
gggactggttttcttaagtttaaaactgtggaagcagctgataatgcaatttcaactgcc
aatgctgcttctgggatgggtattttagtgaagggtagaccattaaaagtttttaaggct
ctggacaagaaatcagctcatgagaaagaactggagaaagaaaaaaatgaggttcatgac
caccgcaatctttacttggcaaaggagggacttattcttgccgggactccagctgctgaa
ggggtttcagccagtgatatggcaaaacgtaaagatttggaaaggaaaaagaagacgaag
cttcaatctccaaatttccatgtttcaaaaactagacttgttatctacaacttaccgaag
tccatgactgaaaaacaactaaagaagctttgcattgatgcagtcatctctagagctacc
aagcaaaaacctgtaattcgacagataaagattttaaaagatggaaggaaaggaaaggct
actcaagaaaaacagttttcccgtggagttgcctttcttgaattttcagagcatcaacat
gcccttgttgctttgagagttcttaacaataatcctgaaacttttggtcctgaacatcgg
ccgattgtggagtttgcgcttgataatgttcaaacgttgaaactacgtaatgcaaagcta
caatatcagcagcaggctcctcgtgatgacaacagaaacgaaaatgataaacccgacaat
gcaggagtttacacacatggagccgacagaaaacgaaaatctcaagagcatgacaaacca
acaaaagacttgggattgaattcaaataatgaacaaggcagtaaagtggcaaatggaaaa
cctcctcatggagacaaatccaaaagacagaaaggcaaccataagagtacaaacaccgat
gtgttatcatcgaaagaaagtccaaaagcttcagtgagtaagttaaagaataaccaagat
ggccagaatcacggtgctaaattacacgaaggtaaaaatactgccattgacagtaatagt
aggaaaatatcaggaaagaaagatgacgcggtatatggaaagaggaagatgcaaaaccaa
gaacaagcaggggaaaaggtttctaggaaaagggcaaagaagaataaagattcaataggg
aaggacacagtagataagcttgacatgcttatagaacaatataaatccaagttctcacaa
aagggttcccaaggaaatgatggtgagaaaaaacctcaacagcttagaaaatggtaccaa
tcataa
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