Trifolium pratense (red clover): 123882191
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Entry
123882191 CDS
T08949
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
tpra04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123882191
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
123882191
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123882191
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123882191
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123882191
03041 Spliceosome [BR:
tpra03041
]
123882191
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
123882191
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
123882191
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123882191
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123882191
Spliceosome [BR:
tpra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123882191
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
123882191
NCBI-ProteinID:
XP_045786953
LinkDB
All DBs
Position
LG4:38302078..38306672
Genome browser
AA seq
320 aa
AA seq
DB search
MSAQGQPQVQVQGIEEAVLDDIIRRLTEVRLARPGKQVQLSEAEIKQLCTASRDIFLQQP
NLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAY
KIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDSFNCLPVAALIDDKIL
CMHGGLSPDLTNLDQIRILPRPVAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPD
KVAEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLM
CSFQILKPAEKKKFVMSNKM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcacaaggacaaccacaagttcaagttcaagggattgaagaggcggtgcttgat
gacattatccggcgactcacggaggtccgattagcccgacccggaaaacaagttcagcta
tctgaggctgagatcaagcagctgtgtactgcttctagagatatcttccttcaacaacct
aatttacttgaacttgaagcccctatcaagatttgtggtgacattcatgggcagtacagt
gatttgttaaggctctttgagtatggaggtttgcctcctaaagctaattatctcttttta
ggggactacgtggatcgtgggaagcagagcttagaaaccatatgtctgttgcttgcttat
aaaatcaaatatcctgaaaactttttccttttgaggggaaatcacgagtgcgcttccatt
aataggatatatggattttatgatgaatgtaagagaaggtttaatgtgaggctttggaaa
gcttttacggactcttttaactgccttcctgtggcagctcttatagatgataagatattg
tgcatgcatggtggtctttctcctgacctcacaaatttggatcaaatcaggattctgcct
cgtccagttgctattcccgacactggtttgctctgtgatttgctttggtctgatcctggt
agagatgtgaagggttggggcatgaatgacagaggagtgtcctacacttttggccctgat
aaggtggctgaatttttaactaaacatgacttggaccttgtttgccgtgctcatcaggtt
gtagaagatggatatgaattctttgcagacaggcaacttgtgacaatattttcggctcca
aattactgtggtgaatttgacaatgctggtgcaatgatgagtgtggacgagaacttaatg
tgctccttccagattcttaaacctgcagagaaaaaaaagttcgtgatgtcaaacaagatg
tga
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integrated database retrieval system
