Trifolium pratense (red clover): 123882365
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Entry
123882365 CDS
T08949
Name
(RefSeq) alpha-mannosidase
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
123882365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123882365
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
123882365
Membrane trafficking [BR:
tpra04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
123882365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Glyco_hydro_57
Nucleolin_bd
Motif
Other DBs
NCBI-GeneID:
123882365
NCBI-ProteinID:
XP_045787170
LinkDB
All DBs
Position
LG4:complement(50125104..50134197)
Genome browser
AA seq
1017 aa
AA seq
DB search
MGNARTFSVFTFLLLFCFYGTLVSAYTKYNTGAGVVEGKLNVHLVPHSHDDVGWLKTVDQ
YYVGSNNTIQGACVENVLDSVVWSLQKDPNRKFVFAEIAFFHRWWVEQSPETQEQVKKLV
AAGQLEFVNGGWCMHDEATVHYIDMIDQTTLGHRFIKDQFNTTPRAGWQIDPFGHSAVQG
YLLGAELGFDSVHFARIDYQDRAKRKGDKSLEVIWRGSKTFGSSAQIFANTFPVHYSAPR
GFNFEVSNTYDPLQDDHRLFDTNIEQRVRDFIDAAIIQANVTRTNHIMWTMGDDFQYQYA
ETWFKQMDKLIHYVNKDGRLNALYSTPSIYTNAKNAANQLWPLKTDDYFPYADSSNAYWT
GYFTSRPALKRYVRTLSGYYLAARQLDFFAGKRSTTISNTFDLGEALGLAQHHDAVSGTA
KQHTTDDYAERLAIGASKAEAVVSSSLACLANKQSGDQCSALTSAFSQCQLLNISYCPPT
EGNIPQAKELVVVVYNPLGWNRTDIVRIPVNEANLGVKDSSGNNLEVQYVDVDDVTKDLR
KLYVNAYLGLSPKQAPKYWLLFQVSVPPLGWSTYFISKAAGKSTRRKGDLSHHNSKNGEN
IDIGPGNLKMSFSSTSGKLNRIYNSKTGVNIEIQQNYLWYASSVGDITDTQASGAYIFRP
NETSPHIVSRSVPFKVIRGPLVDEVYHKFSSWIYQVTRLYKGKDHAEIEYTIGPIPTGGG
FGDGIGKEVITRITTNMATNKEFYTDSNGRDFLKRVRDHREDWPLNVTQPVAGNYYPLNL
GIYTTDKKSEFSVLVDRATGGSSIKDGEVELMLHRRLLSDDGRGVGESLDEEVCVIENNN
ATCEGLTVRGNYYISIDNVGAGSRWRRTTGQEIYSPLLLAFTHENAENWKSSHLTKGTVM
DPNYSLPPNVALITLEELDGGIVLLRLAHLYEPNEDAQYSTLAKIELKKLFATKTINELK
EVSLSANQEKSEIKKLTWKVEGDKGQEPQAVRGGTVSTSDFVVELGPMEIRTFLLKF
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcaaggactttctcagtgtttacttttcttctcttgttttgtttctatgga
acacttgtttctgcatacacaaagtacaatactggtgctggtgttgttgaaggaaaattg
aatgttcatttggttccacactcccatgatgatgttggttggcttaagactgttgatcag
tattatgttggctccaacaataccattcagggagcatgtgttgagaatgtgttggactca
gtggtttggtcccttcaaaaggatccaaatagaaaatttgtgtttgcagagattgcattt
ttccatcgatggtgggtagaacaaagtcctgaaacgcaagaacaagtcaaaaagcttgtg
gctgccggtcagctagaattcgtaaatggtggttggtgtatgcacgatgaagctacggtc
cactacatagacatgattgatcaaacaactttggggcatcgttttataaaggaccaattt
aatacaacacctcgtgctggttggcaaattgacccttttggtcactctgctgtacaaggt
tacctacttggagctgagcttgggtttgattcagtacactttgctagaattgattatcaa
gacagagctaaacgcaaaggtgacaaatcacttgaagttatttggcgtggttccaaaaca
tttggttcttcagctcaaatttttgccaacacttttcctgttcattatagtgctccaaga
ggtttcaactttgaagtctctaatacttatgatccattacaggatgatcatcgtttattt
gataccaatatcgaacagcgtgtcagggattttattgatgctgctattatccaagcgaat
gtgacgaggacaaaccatatcatgtggacaatgggtgatgattttcaataccaatatgca
gaaacttggttcaagcaaatggataaattaattcactatgttaataaggatggtaggctg
aatgccttgtattctactccatcaatttacaccaatgcgaaaaacgctgcaaaccagttg
tggccactgaaaaccgatgactactttccgtatgctgatagttcaaatgcatattggaca
ggctatttcactagccgccccgccttaaagcgatatgttaggacgctaagtggttactat
ttggccgcacgtcaacttgatttttttgctggaaaaagatcgacaactatatccaatact
tttgaccttggagaggctctaggacttgcacagcaccatgatgctgttagtggaactgct
aaacaacatacaacggatgactatgcggaacggttggctattggagcctctaaggctgaa
gcagttgttagctcttctttggcatgtcttgctaataaacaatcaggcgatcaatgttca
gcacttacatcagcattttctcagtgtcaattactcaatatcagttactgccctccaaca
gaaggcaatattccacaagctaaagaattggtagtggtggtgtataaccctcttggatgg
aatcgtaccgatatagtcagaataccagttaatgaagctaatcttggagtcaaagattca
tctggaaataaccttgaagtacaatatgtggatgtggatgatgttacaaaagatttaaga
aaattatatgtaaatgcctatttgggattgtctccaaaacaagccccgaagtactggctt
ttgtttcaagtgtccgtacctccgcttggatggagcacatacttcatatctaaggcagca
ggaaaaagtacaaggagaaaaggtgatctctcacaccataacagtaagaatggtgaaaac
attgacatcgggccgggaaacttaaagatgtcattttcttcaacttcaggaaaactcaat
aggatatataattcaaaaactggagttaatatagaaattcaacaaaactacctttggtat
gcctctagtgtgggtgatataacagatactcaggcatctggtgcatatatattccgccca
aatgaaacctctccacatattgtttcgagatcagtgcccttcaaggtaatccgtggaccg
ctagttgacgaggtttatcataagtttagttcttggatttaccaggttactaggttgtac
aaaggcaaagaccatgctgaaatcgaatacactattggtccaattcctaccggtggtgga
ttcggtgatggaattggaaaagaggtaatcacaagaattacaacaaatatggccacaaac
aaggagttttataccgattctaatggaagagattttctgaaacgggttcgagatcataga
gaagattggccgcttaatgttactcagcctgtagcaggaaactactatccactcaatctt
ggaatttatactacggataagaaatctgaattctcggtcttagttgatcgtgccaccggt
ggatccagcatcaaagatggcgaggtggaattgatgcttcataggcgccttctctcagat
gacggtagaggagttggggaatcactcgatgaagaagtttgtgtaatagagaataataat
gctacatgtgaaggactgacagttagaggaaattactatatcagcatcgacaatgtcgga
gctggttcgcgctggcgccgtacaactggtcaggaaatttactcaccactcttattggct
tttacacatgagaatgcggaaaattggaagtcctctcatttaaccaaaggaactgtcatg
gatccaaattacagcttgcctcctaatgttgccttgataactcttgaggagttggatggt
gggattgttcttctccgattggcacatctatatgagccaaacgaagatgctcaatattca
actctagccaaaattgaactaaaaaagttgtttgctacaaaaacgataaatgagttgaaa
gaggtaagtttatcagctaaccaagaaaagtcagaaataaaaaagttgacatggaaggtt
gaaggggacaaaggacaagaacctcaagcagttaggggaggtactgtaagcacttcagat
tttgttgttgagcttggtcccatggaaattcgtactttcctgttgaaattttaa
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