Trifolium pratense (red clover): 123882873
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Entry
123882873 CDS
T08949
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03082
ATP-dependent chromatin remodeling
tpra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123882873
03083 Polycomb repressive complex
123882873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123882873
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
123882873
Histone modification proteins
HAT complexes
HATB complex
123882873
HDAC complexes
Sin3A-HDAC complex
123882873
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
123882873
PRC2.2
123882873
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
123882873
Heterochromatin formation proteins
Other heterochromatin formation proteins
123882873
Chromatin remodeling factors
NuRD complex
123882873
NuRF complex
123882873
NuRF complex (fruit fly)
123882873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
123882873
NCBI-ProteinID:
XP_045787472
LinkDB
All DBs
Position
LG5:complement(12495827..12501612)
Genome browser
AA seq
515 aa
AA seq
DB search
METPPSTQGGVVKKKETRGRKPKPKEDKKDEQQQNVKSPRESKKSQQHQQNQQHQQQHQA
SVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVP
NTLVIANCEVVKTRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVAT
HTDSPDVLIWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDK
TVVLWSIEDHVTSSATDSKSGGSIIKQKSGEGNDKNVDSPSVGPRGIYSGHDDTVEDVAF
CPSSAQEFCSVGDDSCLILWDARVGSSPAVKVEKAHDADLHCVDWNPHDNNLILTGSADN
SVRLFDRRNLTSNGVGSPIHIFEAHKAAVLCVQWSPDKASIFGSSAEDGLLNIWDYEKVG
KKIERAGKTINSPAGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWR
MSDLLYRPEDEVLEELEKFKAHVVACAAKTEKAEK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggagactcctccttcaacacaaggtggtgtagtgaagaagaaggaaacaagaggtaga
aaacctaaaccaaaggaagacaaaaaagatgaacaacaacaaaatgtcaaatcaccaaga
gaatcgaaaaaatcacaacaacatcaacaaaatcaacaacatcaacaacaacatcaagct
tctgttgacgagaaatacactcaatggaaatctcttgttcctgttctttatgattggctc
gctaatcataatcttgtttggccttctctctcttgccgttggggtcctcagcttgaacaa
gctacttataagaatcgacagcgattatatctttctgagcagactgatggtagtgttccg
aatactttggtgattgcgaattgtgaggttgtcaagactagggttgcagctgcagagcat
atttctcagtttaatgaagaggcccgctctccatttgtgaagaagtacaagactatcata
catccaggagaggtgaacagaattagagaattgccacaaaattccaagattgtggctact
cacacggacagccctgatgttctcatttgggatgttgaaagtcaacctaaccgtcatgct
gtccttggagctacaaattctcgacctgatttgatattgaccggacaccaagataatgca
gagtttgctcttgcaatgtgcccaactgagccctatgtgctttccggaggaaaggataaa
acagtggtgttgtggagtattgaagaccatgtaacatcttctgctacagactccaaatct
ggtggatccattatcaaacaaaaatctggggaaggtaatgacaaaaatgttgatagccct
tctgtcggaccaagaggtatctattctggtcatgatgatactgttgaagatgtggctttt
tgcccttctagtgcgcaggaattctgtagtgttggagatgattcttgtctcatattatgg
gacgcacgtgttggctcaagtcctgcggttaaggttgaaaaagctcacgatgctgatctt
cactgtgttgactggaatccccatgataataatctgattcttactgggtctgcggataat
tctgttcgcttgttcgatcgtcgtaatctcacctccaatggggttggatctcccatccat
atatttgaggctcataaagctgctgttctttgtgttcagtggtctccagacaaagcatcc
atatttggaagttcagcagaagacggtctcttgaacatttgggattatgagaaggttggt
aaaaagatagagcgagctggaaaaacaataaattctcctgcagggctgtttttccaacat
gctggtcatagagacaaagttgttgactttcactggaatgcatatgatccatggacaatt
gttagtgtgtccgatgattgtgaaagtactggcggaggaggaacattgcagatatggcgc
atgagtgacttgctttacagaccagaggatgaggttttggaagagctggagaaattcaaa
gctcatgtggtggcttgtgctgcaaagaccgagaaggccgaaaaatga
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