Trifolium pratense (red clover): 123883097
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Entry
123883097 CDS
T08949
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123883097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123883097
03036 Chromosome and associated proteins [BR:
tpra03036
]
123883097
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123883097
Coactivators
SAGA/TFTC/STAGA complex
123883097
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123883097
STAGA complex
123883097
TFTC complex
123883097
SAGA complex
123883097
SLIK complex
123883097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
Motif
Other DBs
NCBI-GeneID:
123883097
NCBI-ProteinID:
XP_045787747
LinkDB
All DBs
Position
LG5:complement(43647800..43654965)
Genome browser
AA seq
589 aa
AA seq
DB search
MAENVIGSPPSTMENPSSSNPTIPTPSPISQQQQQSPSIHMSSSSPSLSQDQQQQHSQLH
SINNINPNPNPNSNVSNFQLQQSLQRSPSISRLNQIQPQQQQQQQQQQVVRQQLYGGQMN
FGGSAAVSAQQQQLSGAGGVGIGGNASNLSRSALIGQSGHFPMLSGAGAGQFNLLASPRQ
KSGLVQSSQFSSGNSAGQSLQGMQQAIGMMGSSNLASQMRTNGALYAQQQQLRMTPAQIR
QQLSQQASLNNQQVQGLPRSSSLAFMNSQLSGLSQNGQPAMIHNSLTQNQWLKQMPAMSG
PASPLRLQQHQRQQQLASSGQLQQNSMTLNQQQLAQLLQQKSMGQAQLQQQQPSSQQQQQ
QQQQLLQQQQQQQSQLQASVHQQQQLQSPRMTGPTGQKSLSLTGSQPDATASGTTTPGGS
SSQGTEAATNQVLGKRKIQDLVAQVDPHGKLDPEVIDHLLELADDFIDSVTTHGCILAKH
RKSSTLESKDLLLHLEKNWDLTVPGYSSEEKKYQSRPLFNDLHKRRLDAVRTLMESSKLP
ESSINNSKDISRQGHPNPAASHHLMRPLSSDQLVSHSSTSQILQPMTRF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacgtaatcggttcaccaccttcaacaatggaaaacccctcttcttcaaac
cctacaattccaacaccttcaccaatttcccaacaacaacaacaatctccttcaattcac
atgtcatcttcatcaccgtctctttctcaagatcaacaacaacaacattcacagttacat
agtatcaataacattaaccctaaccctaaccctaattctaatgtctccaattttcaactt
caacaatcacttcaacgttctccttctatttctcgccttaatcaaattcaacctcagcag
cagcagcagcagcaacagcagcaagttgtgaggcagcaactttatggtgggcaaatgaat
tttggtggatcagctgctgtttctgctcagcaacagcaattaagcggcgctggtggtgtt
ggtatcggtggtaatgcttccaatttgtcgcgatcagctttaatcggacagagtggtcac
ttccctatgttgtctggtgccggagcagggcagtttaacctattagcctcgccgaggcag
aaaagtggtttggtgcaatcatcgcaattttcttcgggtaattctgctggacagtcacta
caaggaatgcaacaagcaattgggatgatggggtcgtccaatctagcctctcaaatgaga
actaatggagctctttatgctcagcagcagcagcttcgaatgactccggcccaaattaga
cagcagctctcacagcaggcttcacttaataatcaacaggttcaaggtttaccaaggtca
tcgtcccttgcttttatgaattctcagttgtctgggttgtctcagaatgggcagcctgcc
atgatacataattctttaacacagaatcagtggctcaagcaaatgccagcaatgtctggc
cctgcctctccgttgcgtcttcaacaacatcagaggcagcagcagctggcttcatctggt
caactgcaacaaaactctatgaccctaaaccaacagcaattagcccaattgttgcagcag
aagtccatggggcaagctcagcttcagcagcagcagccatcctctcagcagcagcagcag
caacaacaacaactattacagcagcagcaacagcaacaatcgcaactacaagcatctgtt
catcaacagcaacaactgcagtctccgaggatgacaggacctacaggtcaaaagtcacta
agtttaacaggatcgcagccagatgctactgcatctggcacgaccacacccggcggaagt
tcaagtcaaggaaccgaagcagctacaaaccaagtacttggaaagagaaagatacaggat
ttagttgcacaggtggatccacatggtaagctggaccctgaagttatagatcatctttta
gagcttgccgatgacttcattgattctgtaactacacatggttgcattttggcaaaacat
agaaaatcatcaactttggagtccaaggatttattgctacacctagagaaaaattgggat
ttgacagttccaggatattcaagtgaagagaagaagtaccagagtagacctttgttcaat
gaccttcacaagaggcgactagatgcagttcgcacattgatggaatcttctaaactcccc
gaatcaagtattaacaattctaaagatatcagtagacagggacatcctaaccctgcagct
tcccatcacctaatgagacccctgagttcagaccagttggtttctcattcaagtacttct
caaatactacagccgatgacgaggttttaa
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