Trifolium pratense (red clover): 123883130
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Entry
123883130 CDS
T08949
Name
(RefSeq) uncharacterized protein LOC123883130 isoform X1
KO
K24155
rabconnectin-3a
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
123883130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123883130
Membrane trafficking [BR:
tpra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123883130
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
123883130
RAVE complex
123883130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_IFT140_1st
WDR55
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
123883130
NCBI-ProteinID:
XP_045787805
LinkDB
All DBs
Position
LG5:complement(28003236..28017121)
Genome browser
AA seq
2550 aa
AA seq
DB search
MKTNTETDATTTSSSSPCLQNIIDHHLPLRLLRSDIVTPAPTFSNSTIDFLPHFAGYSWI
AYGASSILTITHFPSPLSSHQTRIGPIFRQFFELSDNHSSPVSSVSWSPQIPSSGYLAAS
AQNCIWVFHHDSLASKGSFCWSQNAVLVQRTKVETIRWTGSGDGIISGGMEVVFWKKSNR
CWEIAWKFNADQPQTLVSATWSISGPSATAARPSKEQIEGSLISQGSKCVLVCQSNGLSE
YSKVKLQHPLPIVTIQWRPSSGKLSNRYGRYSKRNVLLTCCLDGTARLWSEIDNGKAKRV
GKNTGCSFCVIAVIEISQCLNGTLGSDIFVTWGTETEGLVRRGEGDKLNFSKEGFEHDVR
KCDWLVGFGPGLLLSFWAVHCLDDVSPLRFPRVTLWRKHELQSHDIGNIYKFDSSDFKNA
LLLHKVIISRNSLSGPPSICSPLQLLPCNSLVWSFFNFQEIRDAVESSLDNGKTDKISSH
LTGGSLNLDGHSEKILKVSIHPYTCEAQVAASLDSNGLLLFWSLSNISNSILGCPTLVPT
WELCGKLATKHSCSMYTSLTWAPSILDEQLVFFMGHTRGVDCFIVNISRTEEENMECHYL
CTIPFTGHGPYEDGPHDIFANPLNSTCNKTFRNNKLMLLAIWTGRFQALSWEVNLHSFDM
STSCCECNFDAKSLDENSVWAFESTFASKRYCITVIPCSSKFPNSNDVVTSFAVADPGTP
SHNQEFGFANDLCSSCPTYIMATGCSDGSLKLWKTNRGNPLTLHLPWELVGMFIAHNGPV
KGICFTDCGQKVATFCNENDSSAVNTIHIWDAVNLIISGTFILEDTLMVESDVITLKWLN
LGTGELLLGVCLQNELQVYAQKRYAGLSWSNSVNFPKLNVWSHIAFARTSLPINDFLWGP
RAAAVVVHGNYFSIFSHWLFHVDKMQRSNFRSHNSDPIAYNCKGETSEDISSAIFTDCDI
GASGELSIGDSHADCDSKLSITNNVKDNNLSSSLFLAKEQLKYELHSKVGLWSILEVAER
ISGSLPTYHPNVLLTNISSGNWKRAYVAVKHLVEWLISNYDPIKAQISKRNGLPSIVLSD
YLEGRLSKSSQDKGFNWSGDVSSIASFSQAQSSSIQFSYQSDSSAENKSSSTSTRSELIG
FIQSLEKFPDLPCLTNIERTEILSIIDLLSEVSNLDSSSAYQSLDEPGRRFWVALRFQQL
LFQRKFGRAGSVEELFINSRLFVWAYHSDSKENLFGSVVPNEPSWQEMRALGMGFWYANI
PQLRARMEKLARAQYLKNKNPKDCALLYIALNRIQVLAGLFKISRDEKDKPLVAFLSRNF
QDEKNKGAALKNAYVLLGKHQLELAVAFFLLGGDHSSAINVCAKNLGDEQLALVICRLVE
GHGGPLERHLITKYIYPSATDRGDYWLASLLEWEMGNCYQSFHRMLEFSVNNAAPESTIK
SNSGSFLDPTVGFYCQMLVTKNSTRNAVGEQNSAVLLRWATLMTVTALKRCGIPLEALEY
FTSSLSMLGTADQENELGDVLSSTLKPLPRKSSNWLSADVSVHLEFHVKLNLALCYLSKL
IREHPSWPDTFTESDGDASYSEDYMIQYEKSNDSFKQKLHAGFDLFEQRFSLTPCYLISM
ILLLLSHHGLWYIGYDVTDGSTQGELFQKKRDRSDVSNLSHSQLFKSLFKTAEEISFLYS
RFFSACGMEYSQQSSTLEKDASQCHFEGLLISLWYLRSVLRCQIRSISKDLVKKHLEIID
LFQYYLYFSLAWLHRNSEALLFMVQPFLIARDGCNPYEVDMVNLKKLIPKVAQLLAQNSF
ITNIENLQVCAEDKLGADIKCPVPDDERWKILGTCLWQHMSRFMISNLNLVLAKLEDENL
SGSFHRYRESNTPSNMNHSPRNMDFDNIDLPEQILLVTFSLCDLLTTTVTHISSYHVKQL
AQFLWQKLENDSNDMTLEWLKQTSQSVSNQHEVPDFLELMNRKDNSLVHQLLWDHCANPK
LIRDCFAQEKLNWSKDLNQKPTKGWNDLYAIMTGLYKTDEVGSPVKGTFPSGHASARSNQ
KDIICANIDDFQSPREVYKRNGELLEALCINSTNHQEAAVASNRKGIVFFHLEDEIPFSG
SADHLWTKADWPQNGWAGSESTPAPTCVSPGVGLGSKKGAHLGLGGATVGMDSSAWPSRD
LIGGGALGMPGYAGIGASGLGWETQQDFEDFVDPLATLENTSTRAFSSHPMRPFFLVGSS
NTHIYLWEFNKEKATATYGVLPAANVPPPYALASISALQFDHFGHRFASAALDGTVCTWQ
LEVGGRSNVRPIESSLCFNGQASDVTYVSSSGSIIAVAGYSSNGINVVIWDTLAPPSTSR
ASILCHEGGARSLSVFDNQVGSGSVSPLIVTGGKDGDVGLHDFRYIVTGKAKRHKRSDSR
GPSSPTSLNYDKDHNVDGMLWYIPKAHSGNESLSSFVVMFYCLSNNLHNFMILGSVTKIA
TIPNTSLFLTGSTDGDVKLWDVESSKLIHHWPKIHEKHTFLQSGSRGFGGVVRAAVTDIQ
VVPHGFLTCGGDGNVKLVQLKSHLRGFGDM
NT seq
7653 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaacacagaaacagatgcaacaacaacctcgtcatcatcaccatgtcttcaa
aacatcatagatcatcatcttcctcttcgtcttctcagatccgatatagtaacacctgct
cctactttctccaattcaacaatcgattttctccctcactttgcaggttactcatggatc
gcttatggagcttcttcaattctcaccattacccatttcccttctcctctttcatctcat
caaactcgcatcggtcctatttttcgtcaattttttgaactctccgataatcattcttca
cctgtttcctctgtttcttggtccccccaaattccttcttctggttatcttgctgcttct
gctcaaaattgcatctgggtttttcaccatgattctcttgcgtccaaaggttctttttgt
tggagccagaatgcagtgcttgtacaacgtacaaaagtggagaccatcagatggacagga
tcaggggatggaattatttctggtggaatggaggtagttttctggaaaaagagtaacaga
tgttgggaaatcgcgtggaagtttaatgcagatcagccgcaaacactcgtaagtgcaacc
tggtctattagtggcccttcagcaactgctgcacgtcctagtaaagaacagattgaaggg
tcgttaatcagtcagggaagcaaatgtgtgttagtatgtcaaagcaatggactatctgaa
tattcaaaagtcaaactacagcatcctttacctattgtgacaattcaatggagaccatcg
agtggaaaactatcaaaccgatatggtaggtattcaaaaaggaatgtgttactgacatgc
tgcttagacggaactgcaaggttatggagtgagattgataatggaaaggccaagagggtc
gggaagaacacggggtgctctttttgtgttattgctgttattgagattagtcagtgttta
aatggaactcttggttcagatatatttgtgacatgggggacagaaactgaggggttagtt
agaagaggtgaaggagacaaactgaatttttcaaaagaaggatttgagcatgatgttaga
aaatgtgactggttagttggatttggtcctggattgttgcttagcttttgggctgtccac
tgtcttgatgatgtttctccactgagattcccccgagttacattatggaggaaacatgaa
ctccaaagccatgacataggaaacatttataagtttgactcgtctgattttaaaaacgca
ttgcttctgcataaagtcattatatcaagaaactccttgtctggtccaccgagtatatgc
tcaccacttcagcttttaccttgtaattccttagtttggtcatttttcaattttcaagaa
atacgcgatgctgttgagagctcccttgataatggtaaaacagataaaatctcctcccat
ttgactggtgggtcattaaacctagatggacatagtgagaaaatattaaaggtttcaatt
catccttatacttgcgaagctcaagttgctgcttctcttgattctaatggactgcttctt
ttttggtcactttctaatatttcaaactctattttgggatgtccaacgttggttcctacc
tgggaactctgtggaaagcttgcaactaaacactcatgctcgatgtatactagcttgaca
tgggcaccttcaatacttgatgagcaactggtattttttatgggacataccaggggggtt
gattgcttcatagtcaatataagtcgaactgaagaagaaaacatggaatgtcactactta
tgcactattcccttcactggtcatggtccctatgaggatggcccacacgatatatttgca
aatcctttgaattctacttgtaataaaacatttcgtaacaataaacttatgctgttagca
atttggacggggagatttcaggccctatcctgggaagttaacttgcactcttttgacatg
tcaacaagctgttgtgaatgcaactttgatgctaaaagccttgatgagaacagcgtttgg
gcatttgaaagtacatttgctagtaaaagatattgcattactgtaattccatgttcgtcc
aagtttccgaattccaatgatgtggttactagttttgcagtggcggatcctggcaccccg
agtcacaaccaagagtttggctttgcaaatgatctttgtagtagctgtcctacatatatc
atggccacaggctgctctgatggtagcttgaaactttggaaaactaaccgtggcaatccg
ttgaccctgcacttgccatgggagcttgtgggtatgtttattgcacataatggtcctgtc
aagggtatatgtttcactgattgtggtcagaaagttgctacgttctgtaatgaaaatgat
tcaagtgctgtcaataccatccatatatgggacgctgtaaatctgatcatatcggggact
tttattttagaagatacgttgatggttgaaagcgatgttattactctcaagtggctaaat
ttagggactggtgagttattgcttggagtttgtttgcaaaatgaattgcaagtatatgct
cagaaacgttacgccggtctgtcatggtcaaactcagtaaattttccaaaattgaatgta
tggtctcacattgcatttgctcgcacttcccttccaataaatgatttcttatggggaccg
agagctgctgcagtggtagttcatggaaactacttcagtatatttagtcattggttgttc
catgtggataaaatgcaaaggagtaattttcgttctcataactcagatccaatagcctat
aattgcaagggtgaaacatctgaagacataagttctgcaatttttactgattgcgacatt
ggtgcttcaggagagctttcaattggagacagtcatgcagattgtgattccaagctgtcc
atcacaaataacgtgaaggacaataacctatccagtagcttgtttcttgccaaggaacaa
ttaaaatatgaactccatagcaaggttggtttgtggagcatcttagaagtagctgagcgg
attagtggatctttgcctacttatcaccctaatgtacttcttaccaatataagttcaggc
aactggaaacgtgcttatgtagctgttaagcatcttgttgaatggctcatttctaattat
gatcctataaaggcacagatcagcaaaaggaatggtcttccaagtattgtattgtcagat
tatctagaaggccgtctgtcaaaaagttcccaagataagggattcaattggagcggggat
gtttcttcaattgcatcattttcacaggctcaaagtagctcgatccagttttcatatcaa
tcggattccagtgctgaaaataaaagcagttccacctcaactagatctgagcttattgga
tttattcaatctttagagaaatttcctgatttaccatgtttgaccaacatagaaaggaca
gagattctctcgatcattgatcttctcagtgaagttagtaatctagactcatcttctgca
tatcaaagtcttgatgaacctgggcgaaggttttgggttgcgctaaggtttcagcaacta
ctttttcaaagaaaatttggtagagctggttctgtcgaagaactgttcattaactcaagg
ttgtttgtatgggcttaccactctgattctaaagaaaatttatttggttcagtcgtaccc
aatgaaccatcgtggcaagaaatgcgtgctttgggtatgggcttttggtatgctaacata
cctcaattacgcgcaaggatggagaaattagcaagagcacagtatttgaagaacaaaaat
cctaaggattgtgcattgctgtatattgcattgaacagaattcaagttttggctggcctt
tttaaaatcagtagggatgagaaggacaagcctttagtggcttttctctcgcgtaatttt
caggatgagaaaaacaaaggcgctgctttaaaaaatgcttatgtcttattgggaaaacat
cagctggaattggcagttgctttctttttgcttggaggtgatcattcttctgctataaat
gtttgtgctaagaaccttggggacgaacagcttgcactagtcatttgtcgccttgttgag
ggccatggcgggccattagagcgtcacctaattactaagtatatatatccgtctgcaacc
gatagaggagactactggctggctagccttctggagtgggaaatgggtaattgctatcaa
tcttttcatagaatgttagagttttcagtaaacaatgcggctccagagtccaccatcaag
tccaattctggttcttttctggaccctactgttggattttattgtcaaatgcttgtaaca
aagaatagcacgcgaaatgctgtaggagagcaaaattctgccgttcttttaaggtgggca
actttgatgacagttactgccttaaaaagatgcggtattcctcttgaggcactggagtat
ttcacatcttcactgagcatgcttgggactgcagatcaagagaatgaattgggcgatgtt
ctatccagtacattaaagcctttgccaagaaaatcctctaactggttatctgctgatgta
tctgtgcatctggagtttcatgttaaattgaatttggcactttgctacttatcgaaactg
ataagagagcatccaagttggcctgacacttttacagaatctgatggagatgcctcttat
tctgaagactacatgattcaatacgagaaatcaaatgatagttttaaacaaaagttacac
gcagggtttgatcttttcgaacaaaggttttcactgactccgtgctatctaatcagcatg
atcttactcttgctttcccatcatggactatggtacattgggtatgatgtaaccgatggc
agcactcaaggagaactgtttcaaaagaagagggatagatctgatgtttccaacttatct
cattctcagttgttcaaatccctctttaaaactgcagaagaaatttcctttttgtactca
agatttttttctgcctgcggtatggaatattctcaacaaagttcaactcttgagaaagat
gcttcacagtgtcactttgaaggtcttctgatttcattgtggtatttaagatctgttttg
aggtgtcaaataaggtctattagcaaagatcttgtcaaaaagcatcttgaaatcattgat
ttatttcaatattatttatatttttcattagcttggcttcatagaaactcagaagccctt
ttatttatggtgcaacctttcttgattgcacgtgatggttgcaatccttatgaggttgat
atggtgaatctgaagaagcttatccctaaagttgcgcagttgttggctcaaaattctttc
ataactaatatagaaaaccttcaagtatgtgcagaggataaactaggcgcagatataaag
tgtccagttcctgatgatgaaagatggaagattttagggacctgcttgtggcagcatatg
tctagattcatgatatctaacttgaatttggttcttgctaagcttgaagatgaaaattta
tctggttctttccacagatatagggaatctaatactcctagcaatatgaatcattctcct
agaaatatggatttcgataacatagacttgccagagcagattctattagtcacatttagc
ttatgtgatttactgacgacaacagttactcacatttcttcttatcatgttaaacaactt
gcgcaatttttgtggcagaaattagagaatgattcaaatgatatgactcttgaatggtta
aaacaaacaagtcaatcagtatccaatcagcatgaagtcccggattttttggaattgatg
aacaggaaagataactctctagttcatcagttgttatgggatcactgtgctaatcccaaa
ttgatacgtgactgctttgcacaggaaaaactcaattggtcaaaggatttgaaccaaaag
cctactaaagggtggaatgacctgtatgcaattatgacaggattgtataaaactgacgaa
gtaggatctccagttaaaggaacgtttccaagtggccatgcttctgcaagatccaaccag
aaagatataatttgtgcaaatattgatgactttcagagtcccagagaagtttacaagaga
aatggagaacttttggaggcactgtgtattaactctaccaatcatcaggaagctgcagtt
gctagcaaccggaagggtatagtattctttcacttggaagatgagattccttttagtggc
tcagcagaccatttgtggaccaaggctgattggccacaaaatggatgggcaggttcagaa
tccaccccggctcctacttgtgtttctcctggtgttggccttgggagcaagaaaggggca
cacctcggtcttggtggagcaactgtcggtatggattcttcagcttggcctagcagagac
ttgataggcggtggagcattaggaatgccaggttatgctggtattggtgcctctggattg
ggttgggaaactcaacaagactttgaagatttcgttgatccacttgccactttggagaat
acaagtaccagggctttttccagtcatccaatgaggcctttcttcttggttggttcaagc
aatacacacatttacttgtgggagttcaataaggagaaagctactgctacatatggagtg
ctgcctgctgccaatgtccctccaccttatgctcttgcgtcaatttcagctttacaattc
gatcatttcggtcatcgttttgccagtgctgcattagatggaaccgtctgcacatggcag
ctggaggtaggaggaaggagcaacgttcgtccaatagaatcatccctctgctttaatggc
caagcatcggatgtcacatatgtttcctctagtggatcaataatagctgtggctggatat
agctctaatggtatcaatgtggttatatgggatacattagctccaccttcaacttctcga
gcttccattttatgtcatgaaggaggtgcgcgctccctttcagtatttgacaatcaggta
ggaagtggttctgtttcccctcttattgtaactggtggtaaagatggtgatgttggactc
cacgacttccgctatatagttactgggaaggctaaaaggcataagcgttctgatagcaga
ggtccaagctctcccacatctttgaattatgacaaggaccataatgtagatgggatgctt
tggtatattccaaaggcacactcaggtaacgagagtttatcttcatttgtagttatgttt
tattgcttatctaataatctgcataattttatgatcttagggagtgtcacaaaaatagct
acaatcccaaataccagcttgtttttgactggaagcacagatggagatgtcaagctctgg
gatgttgagagctcaaagttaatacatcactggcctaagatacatgaaaaacacactttt
ctccagtcaggctctcgtggatttggcggtgttgttcgggctgctgttacggacattcaa
gttgttccgcatggttttcttacatgcggcggggatggaaatgtaaagcttgtacagttg
aaaagtcacctgcgtggcttcggggatatgtaa
DBGET
integrated database retrieval system
