Trifolium pratense (red clover): 123883173
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Entry
123883173 CDS
T08949
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123883173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123883173
Enzymes [BR:
tpra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123883173
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
123883173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
123883173
NCBI-ProteinID:
XP_045787865
LinkDB
All DBs
Position
LG5:complement(41193020..41216244)
Genome browser
AA seq
1127 aa
AA seq
DB search
MDKESPKAPSVDKFQLVPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDRIQATRYPHL
YLRFLDVKVGEPSLITDGSVETISPQTCRLSDTTYAAPIYADIEYTQGSPDNLNKVPKRL
IIGRLPIMLRSCCCVLYKRDEAELAKIGECPLDPGGYFVIKGTEKVILIQEQLSKNRIII
DTDKKKNITASVTSSTEKVKTKTTIVMEKEKMWLELNAFQKKVPLMVVMKAMGMENDQEV
VQLIGRDPRYGFLLMPSIEECTKAGVSTQAQALEYLDKQAKGKHPMFNNMQAEKESRAFS
ILRDVLLANVPVREDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLIS
LLFEDLFKSMTTEIRIAADKLLEKSDKAKKFDFLTILSRDTITLGMERTLSTGNFDVKRF
KMHKSGVTQVLQRLSFISALGQMTRVQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEA
CGLVKNLALMTHVTTDEEEAPLISLCYLLGVENMEHLSGEELHTPDSFLVIFNGLILGKH
RRPQRFATALRKLRRACLIGEFVSVYVNEKQCCVYLASDGGRVCRPLVIADKGISRVKAH
HMKELKDGVCTFRDFLRNGLIEYLDVNEENNAMIALYEDEAKLETTHIEIEPFTILGVCA
GLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKSIELVG
YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYVAVRHKYPNGTKDR
LMRPNRARNDMQILDDDGIASPGEIIRPNDIYVNMQSPRDTRSTGSTANLPDSAYQSSYS
SFKKCHGGEVVDRVVLCNDKDSNMCIKVLARHTRRPELGDKFSSRHGQKGVCGTIVQQED
FPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGKFHYGSAFGEKSGHADNVK
TISKTLVNHGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGNGPRTL
ITRQPTEGRANNGGLRVGEMERDCLIAYGASMLIFERLMLSSDPYEVQVCRKCGLLGYYN
HKLKTGICSYCKNGEKISTVKLPYACKLLIQELQSMNIVPRLKLDDA
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggataaggagtctccaaaggctccttctgttgacaaatttcaactcgttcccgagttc
ctcaaggttagaggattggtgaagcaacatttggattcttttaactattttgttagaact
gatatcaagaaaattgttcgtgctaatgatcgcattcaagccactagatacccgcattta
tatctaaggtttctggatgtcaaagttggtgaaccgtcattaataacggatggtagtgtc
gagaccattagcccacagacatgtcggctatctgacacaacgtacgcggctccgatatat
gctgatattgaatacactcaaggaagtcctgataacctaaataaagtgccaaagcgcctt
attattggaagattgcctattatgttgcggagttgctgttgtgttttgtataagagggac
gaagctgagcttgcaaaaattggcgagtgtccccttgaccctggaggatattttgtaatc
aaagggactgagaaggtaattttaatacaagaacaactttcgaagaatagaataattata
gataccgacaagaaaaagaacattactgcatctgttacaagcagcacagagaaagtaaaa
acaaaaactaccattgtgatggaaaaggagaagatgtggttagaattgaatgcatttcaa
aaaaaggttcctcttatggttgtcatgaaagctatggggatggagaacgatcaagaagtt
gtacaattgattggaagagatcctcgttacggtttcctacttatgccatccatagaggaa
tgtacaaaagctggtgtatctacacaagcccaagcattggagtaccttgataaacaggca
aaaggaaaacatcccatgtttaataacatgcaagctgaaaaggaaagtagagcattttct
atcctaagagatgtacttcttgcaaatgtaccagtgcgcgaagataattttcggccgaaa
tgtatatatgttgctgttatgatgagacgcataatggatgcaattctaaataaggatgcg
atggatgacaaggattatgtgggtaacaagcgattggagttatctggccagttaatctct
cttctttttgaggatctttttaagtcgatgacaactgaaattaggattgcggctgacaaa
ttgttggaaaagtcggacaaggctaagaagtttgacttccttactattcttagtcgagat
actatcactcttggtatggaaaggactctttcaactggtaattttgacgttaaaaggttc
aagatgcacaagagtggagtgacacaggtgctacagaggttatcatttataagtgctttg
ggccaaatgacaagagtccagccacaatttgagaagtccaggaaagtaagcggccccaga
gctttgcagcctagccagtggggcatgctttgtccctgtgatactcctgaaggtgaagct
tgtggactggtaaagaacctggctttgatgactcatgtcactactgatgaagaggaggcc
cccctgatttctctgtgctatcttttgggtgttgaaaacatggaacatctctctggagaa
gagcttcatacacccgattcctttcttgtcatttttaatggtttgatccttggcaagcac
agaagaccacagcgttttgctactgcattgagaaagttgcggagagcttgtctcattggc
gagtttgtgagtgtctatgtcaatgaaaagcagtgttgtgtttacttagcttcagatggt
ggtagagtttgccgtcctcttgtcattgctgacaagggaatatcaagagtcaaagctcat
catatgaaagagttaaaggatggagtgtgcacatttagggactttttacgtaatggcttg
attgagtatcttgatgtcaatgaggaaaacaatgctatgattgctttatatgaagatgaa
gcgaaattggaaactacccatattgagattgagcctttcactatcttaggagtttgtgcg
gggctaattccataccctcatcataatcaatctcccagaaacacttatcagtgtgcaatg
ggaaaacaagctatgggaaatatagcatataaccagctacgacggatggacaccttactt
tatctactggtttatcctcaacgacccttgctcacaacaaaatcaattgagctggttgga
tatgataagcttggagcaggtcagaatgccactgtagctgtaatgagttacagtggttat
gatattgaggatgcaattgtcatgaataagtcatctcttgaccgaggctttggccgctgt
atagttatgaaaaggtatgtcgccgtcagacacaagtatccgaatggcacaaaagatcga
ctaatgcgtcccaatagagctagaaacgatatgcagatacttgatgatgatggaattgct
tctcctggcgaaattattaggccaaatgacatttatgtcaacatgcaatcaccacgtgac
acaaggagtacgggatccacagctaacttgcctgatagtgcatatcagtctagttattca
tcattcaaaaaatgtcatggaggtgaagtagttgatagagtagttctttgcaatgataag
gatagcaacatgtgtatcaaagttctagcccgtcacactcggaggcctgagcttggtgat
aaattcagtagcagacatgggcagaaaggtgtctgtggaacaattgtccagcaggaagac
tttccattttctgagaaaggcatttgtccagatctgattatgaatcctcatgggtttccg
agtcgaatgacagttggaaagatgatagagcttcttggagggaaagcaggggtttcgtgt
ggtaaatttcattatggcagtgcttttggggaaaaaagtggtcatgctgacaatgttaaa
accataagtaaaactcttgtgaaccatggcttcaactacagtgggaaagatttcatttat
tcaggtattacgggttgcccattacaagcatatatttttatggggccaatatactaccag
aaattaaaacatatggtgctcgataagatgcatgcgcgtggtaatggcccgcgtactttg
ataactagacagcctacagaagggagagctaataatggaggtctacgagtaggagaaatg
gaacgtgattgcttaattgcatatggtgctagtatgttgatttttgagcgactcatgtta
tctagtgatccttatgaagttcaggtctgtagaaaatgtgggttgctaggatattacaac
cataagttgaaaactggtatttgttcatattgtaagaatggagaaaagatttctaccgtg
aagctaccatatgcatgcaaactcttgattcaggaactccaatcaatgaatattgttcca
cgcttaaaactagatgatgcctaa
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