Trifolium pratense (red clover): 123883256
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Entry
123883256 CDS
T08949
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpra03041
]
123883256
Spliceosome [BR:
tpra03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123883256
Other components
Complex C specific factors
123883256
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF8146
Motif
Other DBs
NCBI-GeneID:
123883256
NCBI-ProteinID:
XP_045787958
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All DBs
Position
LG5:complement(54757788..54764439)
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AA seq
861 aa
AA seq
DB search
MDEDQEMEKFGMENDFEGGEWVGGEFYYRKRREKRHQTKEDVLYGVFADSEDDDDDEYSS
RKRRKDRDFSKKQDFTKPVNFVSSGNFMPNQDNVNENLKEKDENDSYVDEDRPGLGAGLG
FGSASTSGSGLGFNSGPVNGSHRNDESDDNDNGDDKFLPTAFGKKIKEGAMRREKERLEK
KKGQKQKPGLGLGGSVDVGTFETHTKGIGMKLLAKMGYKGGGLGKNQQGILNPIEATLRA
KNKGLGFDSSEKTTMLLPTLQTEKKNTSGGDVQPTVGRSRERSWLKQLKKKKKEEYVTAE
ELLASKQEDSEVVQKIYDMRGPQVRVYTNLSDLNAEEKAKEEDVPMPELQHNVALIVRLA
EADIQEIDSDLRKERDIALSLKKEKENLEAEASFQKNQLDNYEKIMSVLDRVGEDNTLGT
LTLDSLAQCFRDMHKRYPDDYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSQ
WKALLQGDDCFDIWDTSSPYTHLVSEVVLSAVRISGINTWPARDPEPMLRFLESWEKLLP
SSVLADILDNIVMPKLSNAVGTWEPHLETIPIHTWVHPWLPLLGHKLEEIYRTIRFKLST
VLDAWHPSDGSAYAILSPWKTVFDKDSWQQLMHRFIVPKLKAVFVSDEFQVNPASQKLDQ
FYWVMNWASAIPAHLMVDTMEIFFTKWLTVLYRWLCSNPNFEEVTKWYLGWKELIPKELL
ANETIRYKINCGLEMLNQAVEGMEVVQPGLKEKISYIRVSEQRKFENQQKAAASAQPVNA
DGVNEMSMKEIIETYAREHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQNEET
WSLETLARLLELHNRSLSKRR
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatcaagagatggagaaattcggaatggagaatgatttcgaaggtggcgaa
tgggttggtggtgaattctactatcgaaagcgtagagagaaacgacatcaaaccaaagag
gatgttctctatggagtttttgctgattctgaagatgacgatgatgatgagtattctagt
aggaagcgaagaaaagaccgtgatttttcgaagaaacaggacttcactaaaccggtgaat
ttcgtttccagtggaaattttatgcctaatcaagataatgttaatgagaatttgaaagaa
aaagatgagaatgatagttatgttgacgaagataggcctggtttaggtgcaggtcttggt
tttggatctgctagcacgtccgggtctggtttaggttttaattctggtcctgtgaatggt
tctcataggaatgatgaatctgatgataatgataacggtgatgataagtttttgcctact
gcgtttgggaagaagattaaggagggagcaatgaggagggagaaggagagattggagaag
aagaaggggcagaagcagaagcctggtctaggtctggggggatctgtggatgttgggact
ttcgagactcatacaaaaggaattggaatgaagctgctggcgaagatgggttataaaggt
ggtggtcttgggaagaatcagcagggtattttgaatcctattgaggcaacattaagggct
aagaataaaggtcttggatttgattcatcagagaagactacaatgctgttgcccactttg
cagacggaaaagaagaatacatcgggaggagatgtgcagcctacagttggaagatcgaga
gaacgttcgtggttaaagcagttgaagaagaagaaaaaagaagagtatgtaactgctgaa
gagttgttggcgagcaagcaagaagattcagaggttgttcagaagatttatgatatgcgg
ggcccgcaggtacgagtgtatacaaatttgtctgatttgaatgctgaggagaaagcaaag
gaagaggatgtcccaatgcccgagcttcagcataacgtagcactaatagttcggttggct
gaggctgacatccaagagatagatagtgatttgaggaaagagagggatatagcacttagc
ttgaaaaaagaaaaagagaacttggaagctgaggcatcatttcaaaagaatcagctggat
aattatgagaaaataatgagtgtgctagaccgagttggagaagacaacaccttaggaaca
ttaacattggactcccttgctcaatgctttagagacatgcacaaaagatatcctgacgac
tataagttgtgtaacttgtcatgcattgcttgttcatatgctcttcctttgtttatcaga
gtgttccaaggatgggatcctcttcgaaatccttctcatggtttggagttggtatcacag
tggaaggcattgcttcaaggtgatgattgttttgatatttgggacacatcgtcaccttat
actcacttggtttcagaggttgtattatcagctgttagaatatctggtataaatacatgg
cctgcacgggatcctgagccgatgctaaggtttttggagtcatgggaaaagttgcttcct
tcttcagttctcgctgatatattagacaacatagtcatgccaaaactatcaaatgcagta
ggtacttgggaaccacatcttgagaccattcctatccacacatgggtgcatccatggcta
cctttgctagggcacaaattggaggagatctaccggacgattcgtttcaaattgagtact
gttcttgatgcgtggcatccaagtgatggttctgcatatgccatattgtccccttggaag
actgtatttgataaggatagttggcaacaacttatgcaccgttttattgtaccaaagctg
aaggctgtatttgtatctgatgaatttcaagtgaacccggcaagtcagaaacttgatcag
ttttattgggtaatgaactgggcttcagctatcccagctcatctgatggttgacacgatg
gaaatcttctttaccaagtggcttacagttttgtatcgttggttgtgctcaaatcctaac
tttgaagaagttacgaaatggtatttgggctggaaagaacttattccaaaagaacttttg
gcaaatgaaactattcgatacaagatcaattgcggtcttgaaatgttgaaccaggctgtt
gaaggtatggaggttgtgcaacctggtttgaaggagaagataagctatatcagggtaagt
gagcagaggaaatttgagaatcagcagaaagcagcggcctctgctcagcctgtcaatgca
gatggtgtgaatgaaatgagcatgaaagaaatcattgaaacctatgctcgggagcatggt
ttactgttcaaacttaaacctggtagaatgcataatggccatcaaatatatgggtttggc
aatgtcagcataataattgattctctaaatcaaaaggtctatgcccaaaatgaggagaca
tggtctttagaaactcttgcgcgattgctagagttacataatagatctcttagtaaaaga
cgctga
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